Gene Bphyt_4556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4556 
Symbol 
ID6280350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp630539 
End bp632023 
Gene Length1485 bp 
Protein Length494 aa 
Translation table11 
GC content69% 
IMG OID642615646 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_001888299 
Protein GI187919268 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCGCA TGAACTCCTC AAATTCCCCC CATTCGTCCG CACTCGGCCG TGTTCTCGCC 
ACAGTCAGTG TCGGCTTCGT CGTCACGCAA CTCGACGTAA CCATCGTCAA CATCGCGCTG
CCGAAAATCG GCGCGGATCT GCATGCGAAT GTCGCCGGCC TGCAGTGGGT CGTCGACGCC
TACACGCTCG CGTTCGCCGT GCTGATGCTG TCCGCCGGTG CGCTCGGCGA CCGCTTCGGC
GCGCGGCGGC TGTATGCGGG CGGCATCGTG CTATTTGCGC TCGCGTCGCT CGCCTGCGGC
CTCGCGCTCG ACTCGGCCAT GCTGGTAGCG GCGCGCGCGG TGCAAGGCGT CGGCGCCGCC
GCCATGCTGC CGAACTCGCT GGCGCTCCTC AATCAATCGT ACGGACACGA ACCCAAACTG
CGGGCGCGCG CGGTCGGACT GTGGACCGCC GCGGGCGCGA TCGCGATCGC CGCGGGGCCG
GTGGTCGGCG GCCTGCTGAT CGCGGCGTTC GGCTGGCGCA GCATCTTTCT CGTCAATCTG
CCGATTTGCG CCGCCGGCTT CCTGGCGACC TTGCTGTGGG TGCCACGGCC CGAAGCCGCG
ACGTGTCGAA AGCCGTTGTC GCCCGCAACT GCCGCCTCCG ACACGAAGCC GCGCGGCATT
GACCTGGGCG GCCAGTGTCT TGCCGTCGTC GCGCTGACCG CGTTCGTCGC TGCCGTGATC
GAATGGCGGC CACTAGGTCT CGGCCACCCG CTCGTGGCCG GCGGCTTCGT GCTCGCGCTG
ATCGCGGCGA GCGCCTTTGT CCTCGTGGAA TCGCGCGTCG CGGCGCCGAT GCTGCCGCTC
TCGCTCTTCA GCAAGCGCTC CTTCAGCGTG GCGGTGCTGT TCGGTATCTG TGTGAATCTG
ACGTACTACG GCATGGTGTT CGTGCTGAGC CTGTATTTGC AGCGCGTGCG CGGCTATACG
CCGTTGCAGG CGGGCCTTGC ATTCCTGCCG CTGACAGGCG GCTTTTTGCT GTCGAATGTG
GCGAGCGGCT GGGTGGTCGG CCGCTTCGGC GTGCGGGTGC CGATGATTGC CGGCGCGATC
ACCGCCGGGC TCGGCTATGG CCTGCTGCAT TTCGTCGATG CCGGCACGCC GCTTATCGGC
CTCCTGCTGC CGTTTCTGCT GATTCCGTCG GGCATGGGTC TGGCGGTTCC GGCGATGACC
ACCGCCGTGC TCGCCTCGAC GGACGCGCCA CGCGCCGGTA CCGCATCCGC CGTGCTGAAT
ACGGCGCGGC AGGCAGGCGG CGCGATCGGC GTGGCGGCTT TCGGCGCGTT GGCGAGCGGC
GCGGCTGCGG CGCAGATCGT GGCGGGCATG CGGGCGTCGA CCGCCGTGTC GGTCGGCTTG
CTGGCGATCG GCGGCGTGCT GAGCTGTTTC GTGCATCCGC AGCCGCAGTC GCCGGACGCC
GCGCATCGTC ATGCAGGTCG CGAACGGGTC GGCGAATTGC GCTGA
 
Protein sequence
MYRMNSSNSP HSSALGRVLA TVSVGFVVTQ LDVTIVNIAL PKIGADLHAN VAGLQWVVDA 
YTLAFAVLML SAGALGDRFG ARRLYAGGIV LFALASLACG LALDSAMLVA ARAVQGVGAA
AMLPNSLALL NQSYGHEPKL RARAVGLWTA AGAIAIAAGP VVGGLLIAAF GWRSIFLVNL
PICAAGFLAT LLWVPRPEAA TCRKPLSPAT AASDTKPRGI DLGGQCLAVV ALTAFVAAVI
EWRPLGLGHP LVAGGFVLAL IAASAFVLVE SRVAAPMLPL SLFSKRSFSV AVLFGICVNL
TYYGMVFVLS LYLQRVRGYT PLQAGLAFLP LTGGFLLSNV ASGWVVGRFG VRVPMIAGAI
TAGLGYGLLH FVDAGTPLIG LLLPFLLIPS GMGLAVPAMT TAVLASTDAP RAGTASAVLN
TARQAGGAIG VAAFGALASG AAAAQIVAGM RASTAVSVGL LAIGGVLSCF VHPQPQSPDA
AHRHAGRERV GELR