| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4556 |
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| Symbol | |
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| ID | 6280350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 630539 |
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| End bp | 632023 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642615646 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_001888299 |
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| Protein GI | 187919268 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATCGCA TGAACTCCTC AAATTCCCCC CATTCGTCCG CACTCGGCCG TGTTCTCGCC
ACAGTCAGTG TCGGCTTCGT CGTCACGCAA CTCGACGTAA CCATCGTCAA CATCGCGCTG
CCGAAAATCG GCGCGGATCT GCATGCGAAT GTCGCCGGCC TGCAGTGGGT CGTCGACGCC
TACACGCTCG CGTTCGCCGT GCTGATGCTG TCCGCCGGTG CGCTCGGCGA CCGCTTCGGC
GCGCGGCGGC TGTATGCGGG CGGCATCGTG CTATTTGCGC TCGCGTCGCT CGCCTGCGGC
CTCGCGCTCG ACTCGGCCAT GCTGGTAGCG GCGCGCGCGG TGCAAGGCGT CGGCGCCGCC
GCCATGCTGC CGAACTCGCT GGCGCTCCTC AATCAATCGT ACGGACACGA ACCCAAACTG
CGGGCGCGCG CGGTCGGACT GTGGACCGCC GCGGGCGCGA TCGCGATCGC CGCGGGGCCG
GTGGTCGGCG GCCTGCTGAT CGCGGCGTTC GGCTGGCGCA GCATCTTTCT CGTCAATCTG
CCGATTTGCG CCGCCGGCTT CCTGGCGACC TTGCTGTGGG TGCCACGGCC CGAAGCCGCG
ACGTGTCGAA AGCCGTTGTC GCCCGCAACT GCCGCCTCCG ACACGAAGCC GCGCGGCATT
GACCTGGGCG GCCAGTGTCT TGCCGTCGTC GCGCTGACCG CGTTCGTCGC TGCCGTGATC
GAATGGCGGC CACTAGGTCT CGGCCACCCG CTCGTGGCCG GCGGCTTCGT GCTCGCGCTG
ATCGCGGCGA GCGCCTTTGT CCTCGTGGAA TCGCGCGTCG CGGCGCCGAT GCTGCCGCTC
TCGCTCTTCA GCAAGCGCTC CTTCAGCGTG GCGGTGCTGT TCGGTATCTG TGTGAATCTG
ACGTACTACG GCATGGTGTT CGTGCTGAGC CTGTATTTGC AGCGCGTGCG CGGCTATACG
CCGTTGCAGG CGGGCCTTGC ATTCCTGCCG CTGACAGGCG GCTTTTTGCT GTCGAATGTG
GCGAGCGGCT GGGTGGTCGG CCGCTTCGGC GTGCGGGTGC CGATGATTGC CGGCGCGATC
ACCGCCGGGC TCGGCTATGG CCTGCTGCAT TTCGTCGATG CCGGCACGCC GCTTATCGGC
CTCCTGCTGC CGTTTCTGCT GATTCCGTCG GGCATGGGTC TGGCGGTTCC GGCGATGACC
ACCGCCGTGC TCGCCTCGAC GGACGCGCCA CGCGCCGGTA CCGCATCCGC CGTGCTGAAT
ACGGCGCGGC AGGCAGGCGG CGCGATCGGC GTGGCGGCTT TCGGCGCGTT GGCGAGCGGC
GCGGCTGCGG CGCAGATCGT GGCGGGCATG CGGGCGTCGA CCGCCGTGTC GGTCGGCTTG
CTGGCGATCG GCGGCGTGCT GAGCTGTTTC GTGCATCCGC AGCCGCAGTC GCCGGACGCC
GCGCATCGTC ATGCAGGTCG CGAACGGGTC GGCGAATTGC GCTGA
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| Protein sequence | MYRMNSSNSP HSSALGRVLA TVSVGFVVTQ LDVTIVNIAL PKIGADLHAN VAGLQWVVDA
YTLAFAVLML SAGALGDRFG ARRLYAGGIV LFALASLACG LALDSAMLVA ARAVQGVGAA
AMLPNSLALL NQSYGHEPKL RARAVGLWTA AGAIAIAAGP VVGGLLIAAF GWRSIFLVNL
PICAAGFLAT LLWVPRPEAA TCRKPLSPAT AASDTKPRGI DLGGQCLAVV ALTAFVAAVI
EWRPLGLGHP LVAGGFVLAL IAASAFVLVE SRVAAPMLPL SLFSKRSFSV AVLFGICVNL
TYYGMVFVLS LYLQRVRGYT PLQAGLAFLP LTGGFLLSNV ASGWVVGRFG VRVPMIAGAI
TAGLGYGLLH FVDAGTPLIG LLLPFLLIPS GMGLAVPAMT TAVLASTDAP RAGTASAVLN
TARQAGGAIG VAAFGALASG AAAAQIVAGM RASTAVSVGL LAIGGVLSCF VHPQPQSPDA
AHRHAGRERV GELR
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