Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4545 |
Symbol | |
ID | 6277377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 623501 |
End bp | 624724 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642615635 |
Product | protein of unknown function DUF395 YeeE/YedE |
Protein accession | YP_001888288 |
Protein GI | 187919257 |
COG category | [R] General function prediction only |
COG ID | [COG2391] Predicted transporter component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0891031 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGACC TCTCCACTTC GCTTCCGCGC GTGCCGCGCC GTTTCGATAT CAATCCGAAA CCGCTCGGCG CCGCGCTCGT TCTGATCGCG CTCGGCGCGG TTTATCTGGC GCAGACCGTC AGCGGCCGCC AGGCGGCGCT CTATCTCGTC GGCGCGCTGC TCGGCATGTC GCTGTATCAC GCGGCGTTCG GCTTCACTTC GGCATGGCGG GTTTTTATCG CCGACGGCCG CGGCGCCGGC CTGCGCGCCC AGATGCTGAT GCTCGCGCTC GGCGTGTTGC TCTTCTTCCC GGCACTGCAA GCCGGCACGC TGTTCGGCCA TCCGGTGGTC GGACTTGTCG CGCCGGCGGG CACGTCAGTA CTGGTCGGGG CCTTCATGTT CGGCATCGGC ATGCAATTGG GCGGCGGCTG TGCGTCCGGC ACGTTGTACA CCGTGGGTGG CGGCAGCACC CGCATGATCG TCACGCTGGC GGCGTTCGTT ATCGGCTCGG TCGTGGCGAC CGCGCACATG CCGTTCTGGA CCGCATTGCC GTCGCTCAAA CCGCTCTCGC TGGTGACCGT GTTCGGCGCT GGCTGGGCCA TCGCGCTGAA CCTGGCCGTG TTTGCCGCCA TCGCGGCACT CACCGTTCTG ATCGAACGGC GCCGTCACGG CCAATTGGTC AACGAGCCGC CGCGCCAGCC GCATACGTCA CCGTGGCTGC ATGGTCCGTG GCCGCTGTTC GTCGGCGCGA TCGCGTTGAC TCTGCTCAAC TTCGCGACAC TGGCGCTCTC GGGGCGTCCG TGGGGCGTGA CGTCCGCGTT CGCGCTCTGG GGCGCCAAGC TCTTTGCCAC GCTCGGCATC GACGTGGCCG ATTGGCCGTA TTGGGCCGCT CACGCCAATG CGAACTCCCT CGCCGCCCCT GTTACGCATG ACGTCACCTC GGTGATGGAT ATCGGCATCA TCCTCGGCGC AATGTCAGCC GCCGCGCTGG CCGGACGTTA CGCGCCCGTG TGGAAAGTGC CTGCCCGCTC GCTGATCGCG GCGGTGGTCG GCGGCTTGAT GCTGGGCTAT GGAGCGCGCC TCGCCTACGG TTGTAACATC GGCGCCTACT TCAGCGGCAT CGTGTCAGGC AGCTTGCACG GCTGGCTGTG GCTGGCCGCT GCTTTCGCCG GAAACGTACT GGGCACGCGC TTGCGTCCAG CCTTCGGTCT CGAAGTCGAA CGCGTTCGGT CCACCGGCTG CTAG
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Protein sequence | MSDLSTSLPR VPRRFDINPK PLGAALVLIA LGAVYLAQTV SGRQAALYLV GALLGMSLYH AAFGFTSAWR VFIADGRGAG LRAQMLMLAL GVLLFFPALQ AGTLFGHPVV GLVAPAGTSV LVGAFMFGIG MQLGGGCASG TLYTVGGGST RMIVTLAAFV IGSVVATAHM PFWTALPSLK PLSLVTVFGA GWAIALNLAV FAAIAALTVL IERRRHGQLV NEPPRQPHTS PWLHGPWPLF VGAIALTLLN FATLALSGRP WGVTSAFALW GAKLFATLGI DVADWPYWAA HANANSLAAP VTHDVTSVMD IGIILGAMSA AALAGRYAPV WKVPARSLIA AVVGGLMLGY GARLAYGCNI GAYFSGIVSG SLHGWLWLAA AFAGNVLGTR LRPAFGLEVE RVRSTGC
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