Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4543 |
Symbol | |
ID | 6277468 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 622063 |
End bp | 622632 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642615633 |
Product | transcriptional activator FlhC |
Protein accession | YP_001888286 |
Protein GI | 187919255 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.278066 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCAAGC GTAGCCTGAC GGAAGACGCA CAGGAAGTAT TCCGCGCCAT TGCACTGATC GAACTGGGCG CACGCATGCA AGTGCTCGAG AGTGAATTGA CGCTCTCGCG CGACCGCATG ATCCGCCTGT ATCGCGAGGT CAAGGGCGTG TCGCCGCCCA AGGGAATGCT GCCGTTTTCG GCGGACTGGT ACATGACGTG GCTCGCGAAC ATCCACGCGT CGCTGTTCTA CAACACGTAC CTGTTTCTGA AGAACGAAGC GCGCTGCTCG CATCTGGACG CGCTGACCAA AGGGTATCGG CTGTATCTAG AACATTGCCA GCACAGCGAA ACCGAACCCG TGCTGGACTT GACGCGTGCG TGGACGCTAG TGCGTTTCTT CGACGCCGAC ATCCTGCAAT TGACCAAATG CTGCCGTTGC ACCGGCAAGT TCGTGGCGCA CAAACACGAT CTGCAGCACA ACGTGGTGTG TGGCGCCTGC CAGCCGCCGT CGCGTGCCGG CAAGACCAAG AAAGCCGCGG CCGCCCGCCA GGAAGCGCTC GAAGCAGCAC AGATCGCGCA AGCTGCCTGA
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Protein sequence | MLKRSLTEDA QEVFRAIALI ELGARMQVLE SELTLSRDRM IRLYREVKGV SPPKGMLPFS ADWYMTWLAN IHASLFYNTY LFLKNEARCS HLDALTKGYR LYLEHCQHSE TEPVLDLTRA WTLVRFFDAD ILQLTKCCRC TGKFVAHKHD LQHNVVCGAC QPPSRAGKTK KAAAARQEAL EAAQIAQAA
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