| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4536 |
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| Symbol | |
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| ID | 6278318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 613083 |
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| End bp | 614684 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642615626 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_001888279 |
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| Protein GI | 187919248 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.748568 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCT TTGAATCTTT GAGCGGGTGG GGCCGGGCGG CTGCCAGCGG TTTGCTGGTC
GCGTTGCTCG CCGCCTGCTC GTTGGAGCCC ACGTACAAGC GGCCGGACGT GGATGCGCCG
GCTGCGTTCA AGGAAGCGCC GGCGGCGTCG GCTACGGCGG GTGCCTCTGC GCCCTCGGCT
GCGTCGGGTG TGTCGGCGCA GGACAACGGT ACGTGGAAAC AGGCCCAGCC CGCTGACGAC
GCGCATCGCG GCGAATGGTG GACGATTTTC GGCGACCCGC AACTCAATGC ACTCGAGGAG
CAGGCTTCGG CTGCGAATCA GGACCTGAAG GCGGCCGCGG CGCGCGTGCA GCAGGCGCGT
GCAGTGACGC AGGCCGCGAA GTCGGACTGG TTCCCGAAGC TCGATGCGGG CTTCGGCCCG
ACGCGCGAGC GTGCTTCTGC GGCGTCGCAA TTTCAGCCCG ACAGCGTGGG CGGCACCAAC
GGCACCATCT GGCGTGCGCA AACTACCGCG TCGTACGAAG CGGATCTGTT CGGGCGGGTC
GGCTCGAACG TGAACGCGTC GCGTTCGGAC GAACAGCAAA GCGAAGCGCT GTTCCGTTCG
GTGCAATTGT CCTTGCAGGC AGACGTCGCG CAGAACTACT TCCAGTTGCG CGAGCTCGAT
ACGGATCAGG ACTTGTACCG TCGTACGGTG GCATTGCGTG AGGACACGCT GAAGCTGGTC
GAACGGCGCT TCAAGGAAGG CGACATCGGC GAGCTGGATG TATCGCGAGC CCGCAACGAA
CTGGCGAGTG CGCGTGCGGA CGCCGTGGGC GTGGCGCGTC AACGCGCGGC GTCGGAACAT
AGCCTCGCGA TTCTGCTCGG CAAACCGCCG GCGGATTTCT CGTTCGCGGA AGCGCCGCTG
GTTCCGGTCA CGGTGCGCGT GCCGCCTGGC TTGCCTTCCG ATTTGCTGGA ACGCCGGCCG
GATATTTCGG CGGCTGAGCG CGCGATGCAG GCAGCGAATG CGCGTGTCGG CCTCGCGAAG
TCGGCGTTCT TCCCGAAACT CGATATCACC GGCGGCGCCG GCTTCGAATC GGCGACGCTT
GGCGATCTGT TCAAGTGGTC GAGCCGTGCG TTCATTCTCG GGCCGTTTGC CGGCACGGCA
CTGACGCTGC CGTTGTTCGA CGGCGGCCGG CGCAAGGCGA ATCTTGCGCA AGCCCGTTCG
AAGTATGACG AGGACGTGGC GCAGTATCGT CAGCAGGTGC TGGTGGCGTT CCGTGAGGTG
GAGGACAACC TGTCCGATTT GCGTTTGCTC GACGATCAAA TGCGCGAGCA GAACGATGCG
GTTCAGGCTT CGCAACGGGC TGCGCATCTG TCGCGCACGC AGTACACGGA GGGTGCGGTC
AGCTACCTGG ACGTGATCGA CGGCGAGCGG CAGGTGCTGA CTTCGCAACT GCAGGCGAGC
CATCTGTCGG GCACGCAGGC GGTGGCGACC GTCAATCTGA TTCGCGCGTT GGGCGGTGGC
TGGGGTGATG TGAAAGCGGC GGATACGGCG GTGGGTGCGG TTGCGCCGGC ATCCGCGCCG
GTGACGGCCG CCGCTGCCGT GCAACAGGTG GCGAAGCAGT AA
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| Protein sequence | MKRFESLSGW GRAAASGLLV ALLAACSLEP TYKRPDVDAP AAFKEAPAAS ATAGASAPSA
ASGVSAQDNG TWKQAQPADD AHRGEWWTIF GDPQLNALEE QASAANQDLK AAAARVQQAR
AVTQAAKSDW FPKLDAGFGP TRERASAASQ FQPDSVGGTN GTIWRAQTTA SYEADLFGRV
GSNVNASRSD EQQSEALFRS VQLSLQADVA QNYFQLRELD TDQDLYRRTV ALREDTLKLV
ERRFKEGDIG ELDVSRARNE LASARADAVG VARQRAASEH SLAILLGKPP ADFSFAEAPL
VPVTVRVPPG LPSDLLERRP DISAAERAMQ AANARVGLAK SAFFPKLDIT GGAGFESATL
GDLFKWSSRA FILGPFAGTA LTLPLFDGGR RKANLAQARS KYDEDVAQYR QQVLVAFREV
EDNLSDLRLL DDQMREQNDA VQASQRAAHL SRTQYTEGAV SYLDVIDGER QVLTSQLQAS
HLSGTQAVAT VNLIRALGGG WGDVKAADTA VGAVAPASAP VTAAAAVQQV AKQ
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