| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4534 |
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| Symbol | |
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| ID | 6277365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 608553 |
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| End bp | 609827 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642615624 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001888277 |
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| Protein GI | 187919246 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.452412 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTATCC TTCCTCTTTC CCGTCGCCGT GTGGCGATTG CCGCACTTGC CGTCATTGTC
GTGGCCGGGC TGGGCACGTT CGGCGCGATT CGCGTGGACG CGAGCTCGCC CGCCGCGCCG
ACCATCGTGC CGGAAGTCGA TGTGGCCACG GTGGTGCAAA AAACCATCAC CGATTGGCAG
AGCTACTCGG GCCGCCTCGA AGCCGTCGAG AAAGTGGACG TGCGTTCGCA GGTGCCGGGC
ACCATCGTGT CCGTCAACTT CAAGGACGGC GCGCTCGTGA AGAAAGGCGA CACGCTGTTC
GTGATCGACC CGCGTCCGTA TGCGGCCGAG GTGGATCGCG CCGAGGCGCA ACTGGCCGCA
GCACAGGCGC GCACGGGCTA CACGCAAAGC GATTGGGAGC GCGCGCAACG CCTGATCGCC
GACAACGCGA TCGCCAAACG CGACTACGAC GAGAAGCAGA ACGCCGCGCG TGAGGCGAGC
GCCAACCTGA AGGCCGCGCA AGCCGCGCTC GAAACCGCCC GCATCAATCT CGGCTACACG
AAGATTGTCG CGCCGGTTTC GGGCCGCGTG TCGCGCGCGG AAATCACCGT GGGCAACGTC
ATCTCGGCGG GCGCGACGGC TGCGCCGCTG ACCACGCTGG TGTCGGTTTC GCCGATCTAC
GCATCGTTCG ACGCGGACGA ACAAACGTAT CTGCAATATC TGAGCCGCGC GAAAGATGGC
AGCAAGGTGC CGGTGGAACT CGGTCTCGCG GACGAAACCG GCTACTCGCG CAGCGGCGTG
ATCGAGTCGG TGGACAACCG GCTCGACACG TCGTCGGGCA CGATCCGCGT GCGCGCGCGT
TTCGATAACC AGGACGGTGC ACTGATTCCA GGTCTGTATG CACGCGTGAA AGTGGGCGGC
AGCGAGCCGC ATCCGGCGCT GTTGATCGAC GACGCAGCAG TGGGCACCGA TCAGGACAAG
AAGTTCGTGC TGGTGGTCGA TCAGAACAAT CACGTTGCGT ATCGCTCGAT CGACGTGGGC
GGCATGCAAG GCAATCTGCG TGTGGTGAAG GGCGGCTTGA AAGCCACCGA CCGGATCGTC
GTGAACGGCA TACAGCGCGT GCGTCCGGGT GACGCGGTGC GCGCGCACAT GGTGCCGATG
ACCACGGATG GCGATCCGAA TAGCGCACCG CTCGCACAAA AGCAGACGCC CGCACAGCCG
CAATCGCAGG CCCAATCGCA GGCACAAACG CAGGCACAAA CGCAGACGCG CACCAAAGCG
GACAAGAATT CGTGA
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| Protein sequence | MTILPLSRRR VAIAALAVIV VAGLGTFGAI RVDASSPAAP TIVPEVDVAT VVQKTITDWQ
SYSGRLEAVE KVDVRSQVPG TIVSVNFKDG ALVKKGDTLF VIDPRPYAAE VDRAEAQLAA
AQARTGYTQS DWERAQRLIA DNAIAKRDYD EKQNAAREAS ANLKAAQAAL ETARINLGYT
KIVAPVSGRV SRAEITVGNV ISAGATAAPL TTLVSVSPIY ASFDADEQTY LQYLSRAKDG
SKVPVELGLA DETGYSRSGV IESVDNRLDT SSGTIRVRAR FDNQDGALIP GLYARVKVGG
SEPHPALLID DAAVGTDQDK KFVLVVDQNN HVAYRSIDVG GMQGNLRVVK GGLKATDRIV
VNGIQRVRPG DAVRAHMVPM TTDGDPNSAP LAQKQTPAQP QSQAQSQAQT QAQTQTRTKA
DKNS
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