| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4527 |
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| Symbol | |
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| ID | 6279048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 597453 |
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| End bp | 602294 |
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| Gene Length | 4842 bp |
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| Protein Length | 1613 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642615617 |
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| Product | NAD-glutamate dehydrogenase |
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| Protein accession | YP_001888270 |
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| Protein GI | 187919239 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2902] NAD-specific glutamate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.770165 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGCAA AGAACGAAGA AGCCGTCACG CACTTGCTGA ACGATGTCGT CGAATTCGCG
CGCGGGCGAC TACCCGAGCC AACCTTCAAG GTCGTCGAAC CTTTTCTGCG GCACTACTAC
GATTTCGTCG ACTCCGACGA CCTGCAAAGC CGCTCGATTG CGGACCTGTA CGGTGCGGCG
CTCGCACATT GGCAAACGGC GCAACGCTTC ACGCCCGGCG CCGAACGGCT GCGCGTCTAT
AACCCGATTC TCGAACAACA TGGCTGGCAC TCCGATCACA CGGTGATCGA AATCGTCAAC
GACGACATGC CGTTTCTCGT CGATTCGGTT TCGATGGCGG TCAACCGTCA AGGCCTCGCG
CTGCATTCGG TCGTACATCC CGTGTTTCGC ATCTGGCGCG CGCCCGACGG CAGCATCGCG
CGAGTGAGCC AGGGCGCCGA AGAAGCCACC GACTCGCGCT CACACCTGAC CTCGTTCATC
CATTTCGAAG TGGACCGTTG CGGCGATGCG GCAAAACTCG ACGCGCTGCG TGACGAAATC
GCCAAGGTGT TGCGCGACGT GCGGGCGGCC GTCGAAGACT GGCCGAAGAT CGTCGAACTC
GCGCGCGTCA CGATCAAAGG CATGAAAGCC GGCGAGGGCG GACCGGAAGG TCTGGAAGCC
CGCGCGTTTC TCGAATGGAT GGTGGCCGAT CATTTCACCT TTCTCGGCCA GCGCGATTAC
GAACTGGTGC AACATGACAT CGGTTACGGT CTGCGCGCGG TGCCGGGTTC GGGTCTCGGC
ATTCTGCGCG ATGCCTTGCG GCCCGCCGGC GCCGCCGAGA TCACGCCCTT GCCGCCGGCC
GCGGCCGAGA TCATTTCGGG GTCGTCGCCG ATCTTTCTGA CCAAGGCCAA TTCGCGGGCC
ACCGTGCACA GACCGGGTTA TCTGGACTAC GTCGGCATCA AGCTGACGGG CGCGGACGGC
AAGGTGACCG GCGAGCGGCG TTTCATCGGT CTCTATACGT CCACGGCGTA TTTCGTGTCG
GCCGCGGAGA TTCCGATCGT GCGGCGCAAA TGCGCGAATA TCGTGAGACG AGCCGGTTTC
CTGCCGAAAG GTCATCTGGC GAAATCGCTG GTCACGGTGC TCGAAACCTA TCCACGCGAT
GAGCTGTTTC AGGCCGAAGA GAATCAGCTC TACGATATCG CGCTAGGCGT GCTGCGTCTG
CAGGAGCATC AGCGTACCCG GCTGTTCATA CGGCGCGACC GTTTCGACCG GTTCGTGTCG
TGCCTCGTGT TCGTGCCGCG CGACAAGTAC AACACCGATC TGCGTCAACG CATTGCCAAC
TTGCTGGTCG ACGCATTCAA CGGCGAGAGT GTCGAGTTCA CGCCGCTGCT GTCGGAGTCG
ACGCTGGCGC GCATTCACTT CGTCGTGCAT GCGAAGCCGG GCGGCATGCC CAACGTCGAT
ACGCGCGAGC TGGAAGCGCG GCTCGTGCAG GTCGCACGCC GCTGGCAAGA CGATCTCGCC
GATGCCTTGC TCGACGCCTT CGGCGAAGAG CAGGGCAACC GTCTGCTGCA ACACTACGGC
GATTCGTTTC CCGCGGGCTA TCGCGACGAC TATCCTGCCC GCACGGCGGT GCGCGATATC
GAACTGATCG AACACGTGCA AGGCAGCGAA CGGCTCGCGA TGAATCTGTA CCGCCCGATC
GAATCGGGCC CGCGCGCGTT TCGCTTCAAG GTGTATCGCG CGGGTTTGCC GATCGCCTTG
TCGCGCAGTT TGCCGATGCT CGAACATCTC GGCGTGCGTG TCGATGAAGA GCGGCCCTAT
CTGATCGAGG CGCTGGGCGC GACGCCCGCA TGGATTCACG ACTTCGGCCT TGAACTCGCG
GACGACGCCG AGTTCGACAT CGAACGCGTG AAAGATCTCT TCGAAGAAGC CTTCGAAAAG
GTGTGGACCG GCGCGATCGA AAGCGACGAC TTCAATCGCC TCGTGTTGCG CGCGCAATTG
AATGCGCGCG AGGTGACGAT CCTGCGCGCG TACGCCAAGT ATTTGCGGCA GGTGGGTTCG
ACTTTCAGCG ACGCGTACAT CGAGCGAGCG GTGACCGGCA ATCCGGCGAT CGCGCGCATG
CTGGTCGAAT TGTTCATCGC CCGCTTCAAC CCGGTATTGG GCGAGACGCG CGAGGCGCGC
GTCGACGGTT GGCTCCATAC GATCGACAGC GCGCTCGACC AGGTGCCGAA TCTGGACGAA
GACCGCATAC TGCGCCAATT TCTCGGCGTC ATCAAAGCGA CCAAGCGCAC GAACTACTAT
CGCTTCGATG CCGACGGACA TCCAAAGCCG TATCTCTCCT TCAAGTTCGA TCCCGCGCAA
GTGCCTGGCT TGCCCGAGCC GAAACCGATG TTCGAAATTT GGGTGTACTC GCCACGTGTG
GAAGGCGTAC ATTTGCGCGG CGGCCGCGTG GCGCGCGGCG GCCTGCGCTG GTCGGACCGG
CGCGAGGACT TCCGCACGGA AGTGCTCGGC CTGATGAAGG CGCAGATGGT GAAGAACGTG
GTGATCGTGC CGGTCGGTTC GAAAGGCGGC TTCGTCGTGA AGAATCCGCC GCCGCAAACC
GAGCGCGACG CGTGGATGCG CGAAGGCATT GCGTGTTATC AGACCTTCCT GCGCGGCCTG
CTCGACGTGA CCGACAATCT CGCCGGCACG ACCATTGTGC CGCCGCCCGA CGTGGTACGC
CACGATCCCG ACGATCCCTA TCTGGTGGTC GCCGCGGACA AAGGCACGGC CACGTTCTCC
GACTACGCGA ACGCGATCTC GCAGGAATAT GGCTTCTGGC TCGACGATGC GTTTGCCTCG
GGCGGCTCGG TCGGTTACGA CCACAAGAAA ATGGCCATCA CCGCGCGCGG CGCGTGGGAG
TCGGTCAAGC GGCACTTCCG CGAAATGGGT GTGGATACGC AGACCATGGA CTTCACGGTG
GTGGGCGTGG GCGATATGTC GGGCGATGTG TTCGGCAACG GCATGCTGCT GTCGCCGCAT
ATCAAGCTCG TGGCCGCGTT CGATCATCGG CATATTTTTC TCGATCCGAA TCCCGATCCG
GCGGTCAGTC TTGCCGAGCG CGGACGTCTG TTCATCCTCG ACCGATCGAG CTGGGCCGAC
TACGACCCCT CGCTGATTTC GGCGGGCGGC GGCGTGTTTC CGCGCAGCGC CAAGACGATT
CCGCTCTCGC CGGCGGTGCA GTCGGTGCTC GGCATCAGCG CGCCGGCGCT CGCGCCCGCT
GAATTGATGC GCGCGATTCT GCAGGCGCCC GTCGATCTGC TTTACAACGG CGGTATCGGC
ACGTATGTGA AGGCGAGCCG CGAATCGCAT CTGCAAGTCG GCGATCGTGC CAACGATGCT
ATCCGTGTCA ACGGTTCCGA TCTGCAGTGC AAGGTCGTGG CCGAAGGCGG CAACCTCGGT
CTCACGCAAC TCGGGCGCAT CGAGTTCGCG CAGCGCGGCG GCCGGATCAA TACCGATGCG
ATCGACAACT CCGCGGGCGT GGACTGCTCG GACCACGAGG TCAACATCAA GATTCTGCTC
GGCCTGGTCG TCTCCGACGG CGAAATGACG GAGAAGCAAC GCAACGCGCT GCTCGCCGAA
ATGACCGACG AAGTCGGCTT GCTCGTGCTG CAAGACAATT ACTACCAGAC GCAGGCGCTG
TCGATTGCGG GCCGCTACGG CGTCGAATTG CTCGATGCGG AAGCGCGCCT GATGCGCTAT
CTCGAACGCG CGGGGCGGCT GAATCGCGTG ATCGAGTTTT TGCCGACCGA TGAAGAAGTC
GCCGAACGGC AGGCCGCCAA ACAAGGGCTC ACCACGCCGG AACGCGCGGT GCTGCTTGCC
TACAGCAAGA TGTGGCTGTA CGACGCGCTG CTCGAATCGC CGATGCCGGA AGATCCGCTC
GTCAGCGACA TGCTGGTCGA GTATTTCCCG AAGCCGTTGC GGCAGCGCTT CAGCGAACCG
ATGCAACGCC ACCCGCTGCG CCGGGAAATT CTCGCGACGC ATCTGACTAA CGCGTTAGTG
AATCGCGTGG GTTGCGAGTT CGTGCATCGG CTGATGGAAG AAACCGATGC GCAACCTGGT
GAGATCGTGC GGGCCATCAT CATGGCGCGC GACGTGTTCG ATCTCGACGA CGTCTGGCGC
AGCATCGACG CGCTCGACAA CCGCGTCGCC GACGACATCC AGGCGCGCAT GTTCGTCGAA
GTCGCGCGGC TCGTCGAGCG TTCAGCGCTG TGGTTCCTGC GGCAATTGCA GTCGGGCGCG
GTCAGCGACC GCGACGTTGC CGGCCTGCTC GCGCGTTGCC GCGATGCGGC GCAGCGCCTC
GCGCCGCAAT GGCCCGCGCT GTTGCCGGGC GCCGATCTCG AAGCGCTCTC CGAGCGCCAG
CGCGTGTTCG CGGATGCCGG TGTGGATAGC GAACTGGCGG TGCGGATCGC GGGCGGCGAG
ATCTCGGCCG CGTTGCTCGA TATCGCCGAA GTGGCATCGA CCAGCGGCCG CAGTCTCGAA
CTGGTGGCGG GCGTCTATTT CGCGCTCGGC ACGCTGCTCA ATTCCAGCTG GATCAGCGAG
CGCGCGGCCG CGTTGCCGGT ACCCACGCAC TGGGACATGC TGGCGCGCGC CACGGCGGTG
GCCGACATCG CGCGGCTCAA ACGCGCGTTG ACGACGAGCG CATTGGCCGA CGCCGACGAT
GCCTCCACGC CCGAGGCGCT GGTCGAGGCA TGGCGTGAAA AGCGCACCGT GCAACTGGAA
CGCTACGCGC ACCTGTTGGC CGATCTGCGG GCCACCGGCG GCGCGAGCCT GTCGATGCTG
CTCGTGATCG TGCGTGAAAT GGCGGCGCTC GAAAGGGCAT AA
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| Protein sequence | MQAKNEEAVT HLLNDVVEFA RGRLPEPTFK VVEPFLRHYY DFVDSDDLQS RSIADLYGAA
LAHWQTAQRF TPGAERLRVY NPILEQHGWH SDHTVIEIVN DDMPFLVDSV SMAVNRQGLA
LHSVVHPVFR IWRAPDGSIA RVSQGAEEAT DSRSHLTSFI HFEVDRCGDA AKLDALRDEI
AKVLRDVRAA VEDWPKIVEL ARVTIKGMKA GEGGPEGLEA RAFLEWMVAD HFTFLGQRDY
ELVQHDIGYG LRAVPGSGLG ILRDALRPAG AAEITPLPPA AAEIISGSSP IFLTKANSRA
TVHRPGYLDY VGIKLTGADG KVTGERRFIG LYTSTAYFVS AAEIPIVRRK CANIVRRAGF
LPKGHLAKSL VTVLETYPRD ELFQAEENQL YDIALGVLRL QEHQRTRLFI RRDRFDRFVS
CLVFVPRDKY NTDLRQRIAN LLVDAFNGES VEFTPLLSES TLARIHFVVH AKPGGMPNVD
TRELEARLVQ VARRWQDDLA DALLDAFGEE QGNRLLQHYG DSFPAGYRDD YPARTAVRDI
ELIEHVQGSE RLAMNLYRPI ESGPRAFRFK VYRAGLPIAL SRSLPMLEHL GVRVDEERPY
LIEALGATPA WIHDFGLELA DDAEFDIERV KDLFEEAFEK VWTGAIESDD FNRLVLRAQL
NAREVTILRA YAKYLRQVGS TFSDAYIERA VTGNPAIARM LVELFIARFN PVLGETREAR
VDGWLHTIDS ALDQVPNLDE DRILRQFLGV IKATKRTNYY RFDADGHPKP YLSFKFDPAQ
VPGLPEPKPM FEIWVYSPRV EGVHLRGGRV ARGGLRWSDR REDFRTEVLG LMKAQMVKNV
VIVPVGSKGG FVVKNPPPQT ERDAWMREGI ACYQTFLRGL LDVTDNLAGT TIVPPPDVVR
HDPDDPYLVV AADKGTATFS DYANAISQEY GFWLDDAFAS GGSVGYDHKK MAITARGAWE
SVKRHFREMG VDTQTMDFTV VGVGDMSGDV FGNGMLLSPH IKLVAAFDHR HIFLDPNPDP
AVSLAERGRL FILDRSSWAD YDPSLISAGG GVFPRSAKTI PLSPAVQSVL GISAPALAPA
ELMRAILQAP VDLLYNGGIG TYVKASRESH LQVGDRANDA IRVNGSDLQC KVVAEGGNLG
LTQLGRIEFA QRGGRINTDA IDNSAGVDCS DHEVNIKILL GLVVSDGEMT EKQRNALLAE
MTDEVGLLVL QDNYYQTQAL SIAGRYGVEL LDAEARLMRY LERAGRLNRV IEFLPTDEEV
AERQAAKQGL TTPERAVLLA YSKMWLYDAL LESPMPEDPL VSDMLVEYFP KPLRQRFSEP
MQRHPLRREI LATHLTNALV NRVGCEFVHR LMEETDAQPG EIVRAIIMAR DVFDLDDVWR
SIDALDNRVA DDIQARMFVE VARLVERSAL WFLRQLQSGA VSDRDVAGLL ARCRDAAQRL
APQWPALLPG ADLEALSERQ RVFADAGVDS ELAVRIAGGE ISAALLDIAE VASTSGRSLE
LVAGVYFALG TLLNSSWISE RAAALPVPTH WDMLARATAV ADIARLKRAL TTSALADADD
ASTPEALVEA WREKRTVQLE RYAHLLADLR ATGGASLSML LVIVREMAAL ERA
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