| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4510 |
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| Symbol | |
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| ID | 6277626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 579184 |
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| End bp | 580149 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642615600 |
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| Product | choline ABC transporter, periplasmic binding protein |
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| Protein accession | YP_001888253 |
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| Protein GI | 187919222 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR03414] choline ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.546563 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTGC GCATCAAAGC CCTGCTTGCC CATCTTGCGT GTCTCGCGGC GGCCGTCGGC
GCCGCCGTTA CCGCGCTGCC TGCCTTCGCC CAGGACCCCG CTGCCTGCCG CGCGGTGCAT
TTCGCGGATA TCGGCTGGAC CGACATCACC TCGACCACCG CGCTCGCCTC GACCGTGTTC
GAAGGTCTCG GCTATCAGCC CGTGACGACG GTTGCCTCCG TGCCCATCTC GTTCGCGGGT
TTGAAAAGCA AACAGCTCGA CGTGTCGCTC GGCTACTGGT GGCCGGTGCA GGAAAAAGCG
ATCGCGCCGT TCGTCGATTC GAAATCGATC CAGGTGCTGC AGCCGCCTAA CCTGACCGGC
GCCAAGGCCA CGTTCGCCGT GCCGAGCTAC GAATACGACG CGGGCCTGAA GACTTTCGCC
GACATCGCCA AACACCGCGA TCAGCTCGAC GGCAAGATCT ACGGCATCGA GCCCGGCAGC
AGCGCAAACG CGGCGATCCA GAAGATGATC GCCAACAATC AGTTCGGCCT CGGCGGCTTC
AAGCTGATCG AATCGAGCGA AGCGGGCATG CTGGTCTCGG TCGACCGCGC GATCCGCGAG
AAGAAATGGG TGGTCTTTCT CGGCTGGGAA CCGCATCCGA TGAACATCCA GATCGACATG
AAATACCTCA CCGGCAGCGA CGGCGTATTC GGTCCGAACG ACGGCGAAGC GCGCGTTTAT
ACGCTGACGT CCCCCGACTT TCTGACACGT TGCCCGAACG CGGGCAAGCT CGTGAGCAAT
CTGCGCTTTT CGACGCAGCT CGAAAACGTG GTGATGCAAT CGGTGATGAA CAAGGAAAAG
CCCGCCGACG CCGCCAAGGC GTATCTGAAG AAAAACCCGC AGGTACTCGA CGCATGGCTT
GCCGGCGTGA AGACCTACGA CGGCAAGGAC GGCTTGCCCG CGGTCAAGGC TTATCTCGGT
CTCTGA
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| Protein sequence | MKLRIKALLA HLACLAAAVG AAVTALPAFA QDPAACRAVH FADIGWTDIT STTALASTVF
EGLGYQPVTT VASVPISFAG LKSKQLDVSL GYWWPVQEKA IAPFVDSKSI QVLQPPNLTG
AKATFAVPSY EYDAGLKTFA DIAKHRDQLD GKIYGIEPGS SANAAIQKMI ANNQFGLGGF
KLIESSEAGM LVSVDRAIRE KKWVVFLGWE PHPMNIQIDM KYLTGSDGVF GPNDGEARVY
TLTSPDFLTR CPNAGKLVSN LRFSTQLENV VMQSVMNKEK PADAAKAYLK KNPQVLDAWL
AGVKTYDGKD GLPAVKAYLG L
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