| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4480 |
|---|
| Symbol | |
|---|
| ID | 6277457 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 549665 |
|---|
| End bp | 550909 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642615573 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_001888226 |
|---|
| Protein GI | 187919195 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTCG ATACCGTTGT GCTCGGGGCG GGCATTGTCG GCGTGTGCAC TGCCGTCCAT
CTGCAGAAAC GCGGCCGTCA GGTCGCGCTG GTCGATCGCA AGCTGCCCGG CAACGAGACC
TCGTTCGGCA ACGCCGGGCT GATCCAGCGC GAAGGCGTTT ATCCCTACGC GTTTCCTCGC
GGGCTCGGCA CGTTGCTGCG CTATGCGCGC AACCAGTCGC CCGACGTTCG CTATCATGCC
GACGCGATCG TCAAGACCGC GCCGTTTCTC TGGCAATACT GGCGCAACTC TCATCCAACG
CGGCACGCCG CCATTGCGAA GTCGTACGCG ACGCTGATCG AACATTGCGT GAGCGAGCAC
CGCGCGCTCG CCGCCGACGC CGGCGCGAGC GCGCTATTAA GGCCTATCGG CTGGATAAAA
GTGTTTCGCA CCGCAGCGGC TCGCGACGCG GAAACCCGGC TCGCCGAACG GTGGCATCGC
GAATATGAAG TCGCGTTCGA AGCGCTCGAC GCCGCGCGCC TGCAACAGCT GGAGCCCGAT
CTCGACAAGA CCTTGCTGGG CGGCTTGCGC TATCCGGAAT CCGATTCGGT GAGCGACCCG
AACGCGCTCG TCACCGCTTA TGCCAGATAT TTCGAAGCAC TCGGCGGGCG CTTTTTTATC
GGCGATGCGG ATACGCTGCG CGATGGCTGG CAAGTCGACA CGCAAGCGGG AACGATCTCC
GCGTCATCCG CGGTCGTCGC GTTGGGGCCG TGGTCGGAAC GCGCGAGTGC GCGCCTCGGT
TACCGCTTGC CTCTCGCCGT CAAACGCGGC TATCACATGC ACTACTCGGC GCAGGGCATG
GCGCGCCTGA ATCATCCGGT GCTTGACGCG GAAGGCGGCT ACCTGCTGGC GCCGATGGCG
CGCGGCATCC GTTTGACGAC AGGCGCGGAA ATCGCGGATC TCGAAGCGCC CAAAACACCG
GCGCAACTCG CCGCGGTCGA GCCGGTCGCC CGCACGCTGT TCCCCTTGGG CGAGCGTCTC
GATGACGAAC CATGGATGGG CCGGCGTCCT TGTACGGCGG ACATGCTGCC GATCATCGGC
CCGGCGAAAA AACATCCGGG GCTGTGGTTC GCATTCGGCC ACGCGCATCA CGGGCTGACG
CTGGGTCCGG TAACCGGGCG GCTGATCGCA GAAATGATGA CGGGCGAAGC AACGCTTGTG
GACCCGCGGC CGTTCAGCGT GGAACGATTC GCGCGGCACG GTTAG
|
|---|
| Protein sequence | MKFDTVVLGA GIVGVCTAVH LQKRGRQVAL VDRKLPGNET SFGNAGLIQR EGVYPYAFPR
GLGTLLRYAR NQSPDVRYHA DAIVKTAPFL WQYWRNSHPT RHAAIAKSYA TLIEHCVSEH
RALAADAGAS ALLRPIGWIK VFRTAAARDA ETRLAERWHR EYEVAFEALD AARLQQLEPD
LDKTLLGGLR YPESDSVSDP NALVTAYARY FEALGGRFFI GDADTLRDGW QVDTQAGTIS
ASSAVVALGP WSERASARLG YRLPLAVKRG YHMHYSAQGM ARLNHPVLDA EGGYLLAPMA
RGIRLTTGAE IADLEAPKTP AQLAAVEPVA RTLFPLGERL DDEPWMGRRP CTADMLPIIG
PAKKHPGLWF AFGHAHHGLT LGPVTGRLIA EMMTGEATLV DPRPFSVERF ARHG
|
|---|
| |