Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4479 |
Symbol | |
ID | 6278192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 548109 |
End bp | 549590 |
Gene Length | 1482 bp |
Protein Length | 493 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642615572 |
Product | Na+/solute symporter |
Protein accession | YP_001888225 |
Protein GI | 187919194 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0591] Na+/proline symporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACG TTAATCCCGT GAATCCGGTT GCGATGACCG TCTTTATCGC ATTCTTTGTT CTCGTCACTG TGATCGGCTT CTTTGCCGCG CGCTGGAAAC GGGGCGACCT CACGCAATTG CACGAGTGGG GCCTCGGCGG CCGCCAGTTC GGTACGGTCA TTTCATGGTT CCTCGTGGGC GGCGACTTCT ATACCGCCTA TACGGTGATC GCCGTGCCCG CGCTGGTCTA TTCGGTCGGC GCATATGGCT TCTTTGCCTT GCCGTACACG ATCATCGTTT ATCCGTTCGT GTTTGCGGTG ATGCCGAAAC TGTGGAAGAT CGCGCATGCG AAAAACCACA TTACGGCAGC GGACTACGTG CAGGGCGAAT ACGGCGGCAA GTGGTTCCCG GCGGCCGTCG CGATTACCGG CATTGTCGCG ACCATGCCGT ATATCGCGCT GCAGCTGGTG GGCATGCAGG TCGTGATCAA GGGGCTCGGC GTGACCGGCG AAATGCCGCT GATCGTCGCC TTCGTGATTC TCGCGCTGTA CACGTATGCC AGCGGCCTGC GCGCGCCGGC CATGATCGCG TTCGTGAAAG ACATCATGAT CTATATCGTC GTGATCGCGG CGGTGTGGCT GATCCCGGCC AAGCTCGGCG GCTATGCGCA TGTGTTCGAC GCGGCCGATA CGTATTTCAA GGCCAAGGGC GGCGCGACCG GCATCATTCT GAAGCCGACG CAGTTCACCG CATATGCATC GCTGGCCTTG GGCTCGGCGC TGGCGGCGTT CATGTATCCG CATACGATGA CGGCAGTGCT GTCGTCCTCG TCGGCGAATA CGGTGCGCAA GAATGCGATC TTCCTGCCGG CGTACACGCT GCTGCTGGGT CTGATCGCGT TGCTCGGCTA TATGGCGATT GCGGCCGGCG TGCATGTGAA GTCGGCCTCG GACATGGTGC CGGCGCTGTT CAACACGCTG TTCCCGTCGT GGTTCGTCGG CTTCGCGGCG GCGGCGATTG CGATCAGCGC GCTGGTGCCC GCGGCGATCA TGTCGATCGG CGCGGCCAAT CTGTTCACGC GCAATTTGTG GCGTCCGCTC GTTTCGCCGA ATATCTCGCC GGAAGGCGAG GCTTCCACGG CGAAGATCGT CTCGCTGGTC GTGAAGTTCG GCGCGCTGCT GTTCATCGTG TTCCTGCCGA CGCAGTACGC GATCGACCTG CAACTGCTTG GCGGCGTGTG GATTCTGCAG ATTTTCCCGG CAATCGTGTT CTCGTTGTAC ACGCGTCGTT TGAACACGCC GGGTCTGTTC CTCGGCTGGC TGGCCGGGAT CGTGCTCGGA ACCGGGCTGG CTATTTCGCA AGGCCTCAAG CCGGTGTTCG CCTTGCATCT CGGCGATGCG GTCTATCCGG TGTATATCGG GCTGATCGCA CTGACGGTCA ATATCGTCGT GAGTTTCGTC GTGTCGGTTC TGTCGCCGCG TAGGGTGGTG GCCGCAGCCT GA
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Protein sequence | MSDVNPVNPV AMTVFIAFFV LVTVIGFFAA RWKRGDLTQL HEWGLGGRQF GTVISWFLVG GDFYTAYTVI AVPALVYSVG AYGFFALPYT IIVYPFVFAV MPKLWKIAHA KNHITAADYV QGEYGGKWFP AAVAITGIVA TMPYIALQLV GMQVVIKGLG VTGEMPLIVA FVILALYTYA SGLRAPAMIA FVKDIMIYIV VIAAVWLIPA KLGGYAHVFD AADTYFKAKG GATGIILKPT QFTAYASLAL GSALAAFMYP HTMTAVLSSS SANTVRKNAI FLPAYTLLLG LIALLGYMAI AAGVHVKSAS DMVPALFNTL FPSWFVGFAA AAIAISALVP AAIMSIGAAN LFTRNLWRPL VSPNISPEGE ASTAKIVSLV VKFGALLFIV FLPTQYAIDL QLLGGVWILQ IFPAIVFSLY TRRLNTPGLF LGWLAGIVLG TGLAISQGLK PVFALHLGDA VYPVYIGLIA LTVNIVVSFV VSVLSPRRVV AAA
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