Gene Bphyt_4479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4479 
Symbol 
ID6278192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp548109 
End bp549590 
Gene Length1482 bp 
Protein Length493 aa 
Translation table11 
GC content61% 
IMG OID642615572 
ProductNa+/solute symporter 
Protein accessionYP_001888225 
Protein GI187919194 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG0591] Na+/proline symporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG TTAATCCCGT GAATCCGGTT GCGATGACCG TCTTTATCGC ATTCTTTGTT 
CTCGTCACTG TGATCGGCTT CTTTGCCGCG CGCTGGAAAC GGGGCGACCT CACGCAATTG
CACGAGTGGG GCCTCGGCGG CCGCCAGTTC GGTACGGTCA TTTCATGGTT CCTCGTGGGC
GGCGACTTCT ATACCGCCTA TACGGTGATC GCCGTGCCCG CGCTGGTCTA TTCGGTCGGC
GCATATGGCT TCTTTGCCTT GCCGTACACG ATCATCGTTT ATCCGTTCGT GTTTGCGGTG
ATGCCGAAAC TGTGGAAGAT CGCGCATGCG AAAAACCACA TTACGGCAGC GGACTACGTG
CAGGGCGAAT ACGGCGGCAA GTGGTTCCCG GCGGCCGTCG CGATTACCGG CATTGTCGCG
ACCATGCCGT ATATCGCGCT GCAGCTGGTG GGCATGCAGG TCGTGATCAA GGGGCTCGGC
GTGACCGGCG AAATGCCGCT GATCGTCGCC TTCGTGATTC TCGCGCTGTA CACGTATGCC
AGCGGCCTGC GCGCGCCGGC CATGATCGCG TTCGTGAAAG ACATCATGAT CTATATCGTC
GTGATCGCGG CGGTGTGGCT GATCCCGGCC AAGCTCGGCG GCTATGCGCA TGTGTTCGAC
GCGGCCGATA CGTATTTCAA GGCCAAGGGC GGCGCGACCG GCATCATTCT GAAGCCGACG
CAGTTCACCG CATATGCATC GCTGGCCTTG GGCTCGGCGC TGGCGGCGTT CATGTATCCG
CATACGATGA CGGCAGTGCT GTCGTCCTCG TCGGCGAATA CGGTGCGCAA GAATGCGATC
TTCCTGCCGG CGTACACGCT GCTGCTGGGT CTGATCGCGT TGCTCGGCTA TATGGCGATT
GCGGCCGGCG TGCATGTGAA GTCGGCCTCG GACATGGTGC CGGCGCTGTT CAACACGCTG
TTCCCGTCGT GGTTCGTCGG CTTCGCGGCG GCGGCGATTG CGATCAGCGC GCTGGTGCCC
GCGGCGATCA TGTCGATCGG CGCGGCCAAT CTGTTCACGC GCAATTTGTG GCGTCCGCTC
GTTTCGCCGA ATATCTCGCC GGAAGGCGAG GCTTCCACGG CGAAGATCGT CTCGCTGGTC
GTGAAGTTCG GCGCGCTGCT GTTCATCGTG TTCCTGCCGA CGCAGTACGC GATCGACCTG
CAACTGCTTG GCGGCGTGTG GATTCTGCAG ATTTTCCCGG CAATCGTGTT CTCGTTGTAC
ACGCGTCGTT TGAACACGCC GGGTCTGTTC CTCGGCTGGC TGGCCGGGAT CGTGCTCGGA
ACCGGGCTGG CTATTTCGCA AGGCCTCAAG CCGGTGTTCG CCTTGCATCT CGGCGATGCG
GTCTATCCGG TGTATATCGG GCTGATCGCA CTGACGGTCA ATATCGTCGT GAGTTTCGTC
GTGTCGGTTC TGTCGCCGCG TAGGGTGGTG GCCGCAGCCT GA
 
Protein sequence
MSDVNPVNPV AMTVFIAFFV LVTVIGFFAA RWKRGDLTQL HEWGLGGRQF GTVISWFLVG 
GDFYTAYTVI AVPALVYSVG AYGFFALPYT IIVYPFVFAV MPKLWKIAHA KNHITAADYV
QGEYGGKWFP AAVAITGIVA TMPYIALQLV GMQVVIKGLG VTGEMPLIVA FVILALYTYA
SGLRAPAMIA FVKDIMIYIV VIAAVWLIPA KLGGYAHVFD AADTYFKAKG GATGIILKPT
QFTAYASLAL GSALAAFMYP HTMTAVLSSS SANTVRKNAI FLPAYTLLLG LIALLGYMAI
AAGVHVKSAS DMVPALFNTL FPSWFVGFAA AAIAISALVP AAIMSIGAAN LFTRNLWRPL
VSPNISPEGE ASTAKIVSLV VKFGALLFIV FLPTQYAIDL QLLGGVWILQ IFPAIVFSLY
TRRLNTPGLF LGWLAGIVLG TGLAISQGLK PVFALHLGDA VYPVYIGLIA LTVNIVVSFV
VSVLSPRRVV AAA