Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4460 |
Symbol | |
ID | 6280485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 529610 |
End bp | 532255 |
Gene Length | 2646 bp |
Protein Length | 881 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642615553 |
Product | DEAD/H associated domain protein |
Protein accession | YP_001888206 |
Protein GI | 187919175 |
COG category | [R] General function prediction only |
COG ID | [COG1201] Lhr-like helicases |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.185577 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGAGC CGGCTGACTC CGACGAGACC ACAATCCCGG CGCCTTCTGC TGCGTCGGAG CGGCGCCGCG CGCCCCGGCC GCGCCGCATT CCGCGCAGCC GCGAGCAGCA GGCGCGGCTC GACGCGCGCG AACCGGCGTT CGAGCCGCAG CCTTTTTCCA TCGACGAAAA CGCTGCGCAG CGCCCGTTTG CCGAGAAACT CGGCGAGTGG TTCGAGGCGC GCCGTTGGCA GCCGTTCGAA TTTCAACGCG AGGTCTGGCA GGAGATCGCC CGCGGCGCGA GCGGCTTGCT GCACGCGACG ACCGGCGCCG GCAAAACATG GGCCGTCTGG TTCGGCGCAC TGGCCGCTTT TGCCGCCACG CCAAGTGCGC GAAAGCGCAG CACGCTCCGT ACGCAGCCGG AGCCGCTCAC GGTGCTATGG ATCACGCCGA TGCGCGCGCT CGCCGCGGAT ACGGCGCGCG CGTTGCAAAG TTCGGCGGCG GAACTGGCGG TGCCGTGGAG CGTCGGTTTG CGCACCGGCG ACACGTCGTC GGCCGAGCGC GCGCGGCAGA ACCGGCGAAT GCCGTCGGCA CTGGTCACGA CGCCGGAAAG TCTCTCGCTC ATCCTCACTC GCCCCGATGC ACACGATGTG CTCGCACACG TGCGGCTCGT GATCGTCGAC GAATGGCATG AGCTGCTCGG CAACAAGCGC GGCACGCAGA CGCAACTCGC GCTCGCCCGT CTCGCGCACT GGCGGCCTGA ATTGCAGGTA TGGGGCTTGT CGGCGACGCT CGGCAATCTG TCCTTCGCCG GCGACGTGTT GCTCGCGCCC GTGAAGACGC CACGCGTGAG CGTGCATGGC GCGCTGCCGA AAGCACTGAT CGTCGATACG GTGATTCCCG AGACGATCGA GCGGTTTCCG TGGGGCGGCC ATGTGGGCAT GCGCCAGGTC GGCGCCGTGG CCGAGGCGAT CGGCGAGGCT CAGACCTCGC TCGTGTTTAC CAATACACGC TCGCAATGCG AAGTCTGGTA TCAGGCGCTG CTCGAAGCGC GGCCCGAATG GGCCGGCCTG ATCGCGCTGC ATCACGGCTC GCTCGATCAG GAAGTGCGCG AATGGGTCGA GCGTGGCCTC AAGAGCGGCT TGCTGAAAGT GGTGGTGTGT ACGTCGAGCC TCGATCTGGG TGTCGACTTT CTGCCGGTGG AGCGCGTGTT CCAGATCGGC TCGCCCAAGG GCGTCGCGCG TTTGATGCAG CGCGCGGGGC GTTCGGGTCA TGCGCCGGGG CGGCCGTCGC GTGTCACGAT CGTGCCGACG CATGCGCTCG AACTGGTCGA AGCCGCCGCC GCGCGCGAGG CCGTCGAAAA GCGTCAGATA GAAGGCCGCG AAACGCCTGA GAAACCGTTC GACGTGCTGG TGCAGCATCT CGTCACCGTG GCGATCGGCG GCGGTTTCGA CGCGCGCGAA CTATATGGCG AAATTCGCAG CACCTATGCC TATCGTCAAC TGACGCAGGC GGAGTTCGAC TGGGCGCTCG GCTTCGTCGA AGGCGGCGGC ACGGCGTTGC GCGCGTATCC CGACTACCAT CGCGTGGTGC GCGAAAGCGA CGGCATGTAC CACGTGCCGC GCGAGGATCT GGTGCGAAGG CATCGCAACA ATATCGGCAC GATCGTCGCG AACGGCACGT TGAATGTCGC TTATCTGTCG GGCGGCCGGA TCGGCGCGAT CGAGGAATCG TTTATTTCAC GGCTGAAACC GGGCGATATT TTTACTTTCG GCGGACGTGC ACTCGAATTG ATCCGCGTGC AGGATATGAC CGCGTGGGTG CGGCGCGCGA CATCGTCGCG CGGAGCCATG CCCCAATGGG CGGGCAGCCG TATGCCGCTT TCGTCCGAAC TCGCCGACGC CACGCTGACG ATGCTTGCAC GCGCCGCGAC CGGCATCTAC GACGAACCGG AAATGCGCGC TGTGCGGCCG CTGCTCGAAT TGCAGCAGAA GTGGTCGGCC TTGCCGGAGC CGGGCGTGCT GGTGGTGGAG TTGGTGAAAT CGCGCGAAGG ACATCATTTC TTTTGCTATC CGTTTGCCGG GCGCACGGCG CATATCGGTT TGGGCGCACT GCTCGCATGG CGCGTCGCGC GCGAAAAACC GGGTACCTTT TCTATTTCGA TGAACGACTA CGGCTTCGAA CTGTTGTCCG CGCAACCATT CGATTGGGCG GCGCAACTCG AAAGCGGATT GCTCTCGCCC AAAGAACTGG ATCACGACAT ACTCGCCAGT CTCAATTCGT CGGAACTCTC TCTGCGGCGT TTTCGCGAGA TTGCGCGCGT GTCGGGCCTG GTGTTTCAGG GGCATCCGGG GCAGCAGAAG AGCGCGCGGC AATTGCAGGC GTCGAGTGCT CTCTTCTACG AGATCTTTCG CAATCACGAT CGCGGCAATC TGTTGCTCAA CCAGGCCGAC GATGAAGTAC TGCTGCAGGA ACTCGACGCC CGCCGCATTC GCATTGCGCT CGAACGCATG AACGCGAGCC GGGTGGTCGT CACGCGGCCA AAAAAACCGA CGCCGTTTGC ATTTCCGCTG ATTGTCGGAC GCCTGCGGGA GAAGGTCAGC ACAGAGAAGC TCGCGGATCG CGTCGAGCGG ATGCTGGCCG AACTCGAGAA GGCGGCTCGC GTATGA
|
Protein sequence | MTEPADSDET TIPAPSAASE RRRAPRPRRI PRSREQQARL DAREPAFEPQ PFSIDENAAQ RPFAEKLGEW FEARRWQPFE FQREVWQEIA RGASGLLHAT TGAGKTWAVW FGALAAFAAT PSARKRSTLR TQPEPLTVLW ITPMRALAAD TARALQSSAA ELAVPWSVGL RTGDTSSAER ARQNRRMPSA LVTTPESLSL ILTRPDAHDV LAHVRLVIVD EWHELLGNKR GTQTQLALAR LAHWRPELQV WGLSATLGNL SFAGDVLLAP VKTPRVSVHG ALPKALIVDT VIPETIERFP WGGHVGMRQV GAVAEAIGEA QTSLVFTNTR SQCEVWYQAL LEARPEWAGL IALHHGSLDQ EVREWVERGL KSGLLKVVVC TSSLDLGVDF LPVERVFQIG SPKGVARLMQ RAGRSGHAPG RPSRVTIVPT HALELVEAAA AREAVEKRQI EGRETPEKPF DVLVQHLVTV AIGGGFDARE LYGEIRSTYA YRQLTQAEFD WALGFVEGGG TALRAYPDYH RVVRESDGMY HVPREDLVRR HRNNIGTIVA NGTLNVAYLS GGRIGAIEES FISRLKPGDI FTFGGRALEL IRVQDMTAWV RRATSSRGAM PQWAGSRMPL SSELADATLT MLARAATGIY DEPEMRAVRP LLELQQKWSA LPEPGVLVVE LVKSREGHHF FCYPFAGRTA HIGLGALLAW RVAREKPGTF SISMNDYGFE LLSAQPFDWA AQLESGLLSP KELDHDILAS LNSSELSLRR FREIARVSGL VFQGHPGQQK SARQLQASSA LFYEIFRNHD RGNLLLNQAD DEVLLQELDA RRIRIALERM NASRVVVTRP KKPTPFAFPL IVGRLREKVS TEKLADRVER MLAELEKAAR V
|
| |