| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4460 |
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| Symbol | |
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| ID | 6280485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 529610 |
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| End bp | 532255 |
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| Gene Length | 2646 bp |
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| Protein Length | 881 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642615553 |
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| Product | DEAD/H associated domain protein |
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| Protein accession | YP_001888206 |
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| Protein GI | 187919175 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1201] Lhr-like helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.185577 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAGC CGGCTGACTC CGACGAGACC ACAATCCCGG CGCCTTCTGC TGCGTCGGAG
CGGCGCCGCG CGCCCCGGCC GCGCCGCATT CCGCGCAGCC GCGAGCAGCA GGCGCGGCTC
GACGCGCGCG AACCGGCGTT CGAGCCGCAG CCTTTTTCCA TCGACGAAAA CGCTGCGCAG
CGCCCGTTTG CCGAGAAACT CGGCGAGTGG TTCGAGGCGC GCCGTTGGCA GCCGTTCGAA
TTTCAACGCG AGGTCTGGCA GGAGATCGCC CGCGGCGCGA GCGGCTTGCT GCACGCGACG
ACCGGCGCCG GCAAAACATG GGCCGTCTGG TTCGGCGCAC TGGCCGCTTT TGCCGCCACG
CCAAGTGCGC GAAAGCGCAG CACGCTCCGT ACGCAGCCGG AGCCGCTCAC GGTGCTATGG
ATCACGCCGA TGCGCGCGCT CGCCGCGGAT ACGGCGCGCG CGTTGCAAAG TTCGGCGGCG
GAACTGGCGG TGCCGTGGAG CGTCGGTTTG CGCACCGGCG ACACGTCGTC GGCCGAGCGC
GCGCGGCAGA ACCGGCGAAT GCCGTCGGCA CTGGTCACGA CGCCGGAAAG TCTCTCGCTC
ATCCTCACTC GCCCCGATGC ACACGATGTG CTCGCACACG TGCGGCTCGT GATCGTCGAC
GAATGGCATG AGCTGCTCGG CAACAAGCGC GGCACGCAGA CGCAACTCGC GCTCGCCCGT
CTCGCGCACT GGCGGCCTGA ATTGCAGGTA TGGGGCTTGT CGGCGACGCT CGGCAATCTG
TCCTTCGCCG GCGACGTGTT GCTCGCGCCC GTGAAGACGC CACGCGTGAG CGTGCATGGC
GCGCTGCCGA AAGCACTGAT CGTCGATACG GTGATTCCCG AGACGATCGA GCGGTTTCCG
TGGGGCGGCC ATGTGGGCAT GCGCCAGGTC GGCGCCGTGG CCGAGGCGAT CGGCGAGGCT
CAGACCTCGC TCGTGTTTAC CAATACACGC TCGCAATGCG AAGTCTGGTA TCAGGCGCTG
CTCGAAGCGC GGCCCGAATG GGCCGGCCTG ATCGCGCTGC ATCACGGCTC GCTCGATCAG
GAAGTGCGCG AATGGGTCGA GCGTGGCCTC AAGAGCGGCT TGCTGAAAGT GGTGGTGTGT
ACGTCGAGCC TCGATCTGGG TGTCGACTTT CTGCCGGTGG AGCGCGTGTT CCAGATCGGC
TCGCCCAAGG GCGTCGCGCG TTTGATGCAG CGCGCGGGGC GTTCGGGTCA TGCGCCGGGG
CGGCCGTCGC GTGTCACGAT CGTGCCGACG CATGCGCTCG AACTGGTCGA AGCCGCCGCC
GCGCGCGAGG CCGTCGAAAA GCGTCAGATA GAAGGCCGCG AAACGCCTGA GAAACCGTTC
GACGTGCTGG TGCAGCATCT CGTCACCGTG GCGATCGGCG GCGGTTTCGA CGCGCGCGAA
CTATATGGCG AAATTCGCAG CACCTATGCC TATCGTCAAC TGACGCAGGC GGAGTTCGAC
TGGGCGCTCG GCTTCGTCGA AGGCGGCGGC ACGGCGTTGC GCGCGTATCC CGACTACCAT
CGCGTGGTGC GCGAAAGCGA CGGCATGTAC CACGTGCCGC GCGAGGATCT GGTGCGAAGG
CATCGCAACA ATATCGGCAC GATCGTCGCG AACGGCACGT TGAATGTCGC TTATCTGTCG
GGCGGCCGGA TCGGCGCGAT CGAGGAATCG TTTATTTCAC GGCTGAAACC GGGCGATATT
TTTACTTTCG GCGGACGTGC ACTCGAATTG ATCCGCGTGC AGGATATGAC CGCGTGGGTG
CGGCGCGCGA CATCGTCGCG CGGAGCCATG CCCCAATGGG CGGGCAGCCG TATGCCGCTT
TCGTCCGAAC TCGCCGACGC CACGCTGACG ATGCTTGCAC GCGCCGCGAC CGGCATCTAC
GACGAACCGG AAATGCGCGC TGTGCGGCCG CTGCTCGAAT TGCAGCAGAA GTGGTCGGCC
TTGCCGGAGC CGGGCGTGCT GGTGGTGGAG TTGGTGAAAT CGCGCGAAGG ACATCATTTC
TTTTGCTATC CGTTTGCCGG GCGCACGGCG CATATCGGTT TGGGCGCACT GCTCGCATGG
CGCGTCGCGC GCGAAAAACC GGGTACCTTT TCTATTTCGA TGAACGACTA CGGCTTCGAA
CTGTTGTCCG CGCAACCATT CGATTGGGCG GCGCAACTCG AAAGCGGATT GCTCTCGCCC
AAAGAACTGG ATCACGACAT ACTCGCCAGT CTCAATTCGT CGGAACTCTC TCTGCGGCGT
TTTCGCGAGA TTGCGCGCGT GTCGGGCCTG GTGTTTCAGG GGCATCCGGG GCAGCAGAAG
AGCGCGCGGC AATTGCAGGC GTCGAGTGCT CTCTTCTACG AGATCTTTCG CAATCACGAT
CGCGGCAATC TGTTGCTCAA CCAGGCCGAC GATGAAGTAC TGCTGCAGGA ACTCGACGCC
CGCCGCATTC GCATTGCGCT CGAACGCATG AACGCGAGCC GGGTGGTCGT CACGCGGCCA
AAAAAACCGA CGCCGTTTGC ATTTCCGCTG ATTGTCGGAC GCCTGCGGGA GAAGGTCAGC
ACAGAGAAGC TCGCGGATCG CGTCGAGCGG ATGCTGGCCG AACTCGAGAA GGCGGCTCGC
GTATGA
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| Protein sequence | MTEPADSDET TIPAPSAASE RRRAPRPRRI PRSREQQARL DAREPAFEPQ PFSIDENAAQ
RPFAEKLGEW FEARRWQPFE FQREVWQEIA RGASGLLHAT TGAGKTWAVW FGALAAFAAT
PSARKRSTLR TQPEPLTVLW ITPMRALAAD TARALQSSAA ELAVPWSVGL RTGDTSSAER
ARQNRRMPSA LVTTPESLSL ILTRPDAHDV LAHVRLVIVD EWHELLGNKR GTQTQLALAR
LAHWRPELQV WGLSATLGNL SFAGDVLLAP VKTPRVSVHG ALPKALIVDT VIPETIERFP
WGGHVGMRQV GAVAEAIGEA QTSLVFTNTR SQCEVWYQAL LEARPEWAGL IALHHGSLDQ
EVREWVERGL KSGLLKVVVC TSSLDLGVDF LPVERVFQIG SPKGVARLMQ RAGRSGHAPG
RPSRVTIVPT HALELVEAAA AREAVEKRQI EGRETPEKPF DVLVQHLVTV AIGGGFDARE
LYGEIRSTYA YRQLTQAEFD WALGFVEGGG TALRAYPDYH RVVRESDGMY HVPREDLVRR
HRNNIGTIVA NGTLNVAYLS GGRIGAIEES FISRLKPGDI FTFGGRALEL IRVQDMTAWV
RRATSSRGAM PQWAGSRMPL SSELADATLT MLARAATGIY DEPEMRAVRP LLELQQKWSA
LPEPGVLVVE LVKSREGHHF FCYPFAGRTA HIGLGALLAW RVAREKPGTF SISMNDYGFE
LLSAQPFDWA AQLESGLLSP KELDHDILAS LNSSELSLRR FREIARVSGL VFQGHPGQQK
SARQLQASSA LFYEIFRNHD RGNLLLNQAD DEVLLQELDA RRIRIALERM NASRVVVTRP
KKPTPFAFPL IVGRLREKVS TEKLADRVER MLAELEKAAR V
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