Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4448 |
Symbol | |
ID | 6279604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 515963 |
End bp | 517294 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642615541 |
Product | ribonuclease BN |
Protein accession | YP_001888194 |
Protein GI | 187919163 |
COG category | [S] Function unknown |
COG ID | [COG1295] Predicted membrane protein |
TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0111149 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACATCG ACACGCTTTC CGCCGAGAAC CTCCAGCAGG TGGCCCGCAA GCAGGCCAAC TGGGCCATCG GCGCCTTCAA ACAGTTTGCC GAAAACCGCT GCGCGGCCAT GGCCGCCAGC ATCGCGTTCT ATGCGGCGTT TTCACTCGCG CCCACGCTGG TGATGGTGAT CGCCGTGGCC GGCTGGTTCT TCGGCGCCGA GGCCGCGCGT GGCGAGTTGT TCAATCACAT CCACGGATTG CTCGGCGACC AGGCCGCCGC GGGCGTCCAG ACCATCGTCG AGAACGCGCA TCACAGCGGC AGCGCCGGCG GTATTGCTGC AGTGATTTCG CTCGTGACGC TGGTAATCGG CGCCTCTGCG ACATTTTCGT CGCTCAATAG CGCACTCAAT ATCGTCTGGC CCAATACCGG GCCGCGTTCG TCGAGCGTGA TCGCGCTGGT ACGCGTGCGT CTGATTTCAT TTGGACTGGT GCTGGGCGTC GCGTTCCTGC TGATCGTGTC GCTGGTGCTC GATACGGTGA TCACCTTCGT CGGCAAATGG CTCTGGGGCG ACTCCCCGTA TATCGTGATC GGCAATCTTC TCCAACTCGG CGTCGGCTTG CTCGTGCTGG CGTTCGCCTT CGCCGGCTTG CTCAAGTTTC TGCCGGATGC CCGCGTGCGC TGGCGAGATG CGTTCGTCGG CGGGATAGTC GCGGCCGTGC TGTTTTCGGC GGGCAAGAAG CTGTTCGCGC TGTATCTCGC GCACGCCGGC ATGGCCACCT CGTTCGGCGC GGCCGGTTCG CTCGCCGTGT TGCTGATGTG GCTTTACTTC TCCGCCGCCG TGCTGCTGCT CGGCGCGGAA TTCTCGGCGG CGCGCGGGCG CATGCACGAT CCGCGCGGCG GCTGGGGCAT GCAGAACGAC ACGCCGCCCG GCAGCCGCGC CAAGCTTGCG TCTGTACTGG CGGCATCGAC CGTTGCCGCG GATGCGGTGC CGCACGCCGA CGCGCAAGCG AACGGACGCG CCGCGTCGGA CGACGCCACG CGCAGCCCCG CCTTGCGCGC CGCGAAAGCC GTAGCGCTCG ACGGCGCGGC GCCGCCGGCA ACGTTCCGGG CGCGAGCCGA AAACAGGCCG TCGGCGCGGG CGACGGCGCT CAAGGTCGGC CGTACGGTCG TGCTCGCCGA AGCGCAAGCG ACGCGCATCG CCGCCGTCAC GCTGATCGAA GCAAGCCGCA AGGCCGTTGC GGCCGACCGC TACGTGAGGC GGCATCCGTG GACTTCGGTG CTCTTCGCGG CGACCGCCGG ACTCGCTGCA GCGATGGTCA CGCGCCGCCA TACCGGCAAC AACGAACGCT AA
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Protein sequence | MDIDTLSAEN LQQVARKQAN WAIGAFKQFA ENRCAAMAAS IAFYAAFSLA PTLVMVIAVA GWFFGAEAAR GELFNHIHGL LGDQAAAGVQ TIVENAHHSG SAGGIAAVIS LVTLVIGASA TFSSLNSALN IVWPNTGPRS SSVIALVRVR LISFGLVLGV AFLLIVSLVL DTVITFVGKW LWGDSPYIVI GNLLQLGVGL LVLAFAFAGL LKFLPDARVR WRDAFVGGIV AAVLFSAGKK LFALYLAHAG MATSFGAAGS LAVLLMWLYF SAAVLLLGAE FSAARGRMHD PRGGWGMQND TPPGSRAKLA SVLAASTVAA DAVPHADAQA NGRAASDDAT RSPALRAAKA VALDGAAPPA TFRARAENRP SARATALKVG RTVVLAEAQA TRIAAVTLIE ASRKAVAADR YVRRHPWTSV LFAATAGLAA AMVTRRHTGN NER
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