Gene Bphyt_4431 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4431 
Symbol 
ID6279894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp493870 
End bp494961 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content64% 
IMG OID642615524 
ProductABC transporter related 
Protein accessionYP_001888177 
Protein GI187919146 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.140949 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.44138 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTTCC TCACACTCAC GGACGTAACG AAATCGTTCG GCGATCTGCA GGCAGTCGCC 
GACGTGAACC TGTCGGTGGA AAAAGGCGAG TTCGTTTCGT TGCTCGGGCC GTCCGGCTGC
GGCAAGACCA CGACCTTGCA GATGATCGCG GGCTTCGTCG AGACGACGCA CGGACGCATC
ACGCTCGACG GCCGCGACAT CACGCACATG AAACCGAACA AGCGTGGTCT CGGCATCGTG
TTCCAGAGCT ACGCGCTGTT TCCGCACATG AGCGTCGCGG ACAACGTCGG CTTCGGGCTG
GAGATGCGCA ACATCGACAA GGCCGAGCGC AAGGAGCGTA TTCGCGAAGC GCTGTCGCTG
GTGCGCCTCG ATACGCTCGC GCATCGCTTT CCGCGCGAAC TCTCCGGCGG TCAGCGTCAA
CGGGTGGCGC TTGCCCGCGC CATTGTGATC GCGCCGCCGG TGCTGCTGCT CGACGAACCG
ATGTCCAATC TCGACGCCAA ACTGCGCGAA GACATGCAGT TCGAACTACG CGGCATTCAA
CGCAAGATCG GCACGACCAC CATCATGGTG ACGCACGATC AATCCGAAGC GCTGTCGATC
AGCGATCGCG TGGTGGTGAT GGAAGCCGGC CGCATTACGC AGATCGACAC GCCGTACGAA
GCGTACGAGC GCCCGGAAAA TCGGTTCGTC TCGCAGTTCA TCGGCAAGGC CAACATGCTG
CCGGGCACCG TGGTGGCGCG CGACGGCGAC GCGATCCGCA TCGACCTAGG CCACGATCTC
GCCGAGACGG GACACACGGC GCAATTGCCG GCGCGCGAGC GCGTGGTCGG CGTCGGCGAC
GCGGTGACCT TGTGCATCCG TCCGGAAAAA TTGCGGCTGT GCGCACCGAA CGCGGGACGT
GTGCCGGCCA CCGTGACGAG CCGCTTCTTT CTCGGCAGTC AATGGCTGTA CCGATTGGAC
AGCCGCCTTG GCGAAGTGCT GGTGTGCTGC CAGAACGAAG GCACGGAACC GCTGCCCGAA
GGCGCGACGG TCGGCGTCGA CTGGAACAGC GAGGCGATCC GCTTCATTCA ACGGGACGCG
CATCATGGCT AG
 
Protein sequence
MSFLTLTDVT KSFGDLQAVA DVNLSVEKGE FVSLLGPSGC GKTTTLQMIA GFVETTHGRI 
TLDGRDITHM KPNKRGLGIV FQSYALFPHM SVADNVGFGL EMRNIDKAER KERIREALSL
VRLDTLAHRF PRELSGGQRQ RVALARAIVI APPVLLLDEP MSNLDAKLRE DMQFELRGIQ
RKIGTTTIMV THDQSEALSI SDRVVVMEAG RITQIDTPYE AYERPENRFV SQFIGKANML
PGTVVARDGD AIRIDLGHDL AETGHTAQLP ARERVVGVGD AVTLCIRPEK LRLCAPNAGR
VPATVTSRFF LGSQWLYRLD SRLGEVLVCC QNEGTEPLPE GATVGVDWNS EAIRFIQRDA
HHG