| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4418 |
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| Symbol | |
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| ID | 6279159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 480973 |
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| End bp | 482406 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642615511 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_001888164 |
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| Protein GI | 187919133 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.641884 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCGA TCCTTGTCAA AGTCCTGGCG AGCGCCGCCT TGCTGACGCT CGCGGCGTGC
GCGGTGCAAC CGGAAACGCA CGCCGATTTG CCGCAAACCG TGAAGACGGT CGCGCCCGCC
GCGTGGAATG TCGACGCGCC GCAAGACAGC GTGAGCGCCA ACGCGTGGTG GGACCAATTC
GGCGACCCGG TCATGCATCA GCTGGTCGAA TCCGTGTTGA CCGGCAATCT CGATGTGCAG
GCAGCGGTGG AGCGCGTCAG GCAGGCGCAG GATCTGGCGA AGCAGAATCG CGCGGCGCTG
CTGCCTGAGT TGAACGCGAG CGCGACGGCG TCCGACTCGC GTCAGAACAC GCCGCCGCCG
CTCGGTTATG TGCGCCAGGC CGGCGTCGGC TTGACGGCGA GCTGGACGCC CGATGTATTC
GGCGGCGAAC GTCTTGCCGT GCTGGCGGCG CAGGCGCAGG TGTCGGGGCG CCAGTCGGCA
TTGAACGAGG TGCGCCTCGC ACTCGCGGCG AATACCGCCG CAGCGTATAT CGATCTGCGC
TGGGCGCAAT CGCAGTTGCA GATTCTGAGC GACAACGAGC AGATCCGCGC ACGCGCTTTG
AAGCTCACGC AGCAGCGGCT GCACTATGGG CTGTCGACGC AACTCGACGT CGCGCGCGCG
CAGAACCAGC TCCAGGATTT GCAGGCGCAG ATTCCGCGCG TGCAATCTGC GGTGCAGCAT
CAATTGAGTC TGATCGCGGT GTATTCGGGG CGCACGCCGG AGAGCGTCGA CAGCCTGCTG
CTCGCCAACG CACGCGATAT TCCGGTGCCC GCGCAAAGCG TGCCGCAGAT GCTGCCTTCG
GAGGCGCTTC TGCAGCGTCC CGATGTGCGT ACCGCGTACG CGACGGTCGA GCAGCGCGCA
GCGGAAGTGG GCGTGTCGAA AGCGCAGCGC TATCCGCAGT TCCGGCTCAA TCTCGCCGAC
GGCCTGCTGG CCTCGTCGTA CCTCGGCTTG CCGACGCTGA CCGACAACCT CTTCAGCGCG
GCTTTGAACG CGACGAGCCC GATCTTCAAC GCGGGCCGCA TCACCGCGAA TATCGACGCG
AGCGAAAGCC GCATGCGCGA ATCGCAACTC GGTTTGCAGC AAACCATGCT GCAAGCGCTG
AAGGAAATCG AGGACAACCG CAGCGATCTG GTGAGCGGCG CGGTGCAGGT GCAACGTCTC
GGCGGCGCGC TCGATGCGTC GAACCAGGCG CTGCATTTGT CGAGCGAACT GTACAAGGGC
GGCGCGGCGG ATTTTCTCGA TGTGCTCACC GCACAGGAGG CGTATCTGCG TGACGCGGAG
TCCTTGAACC AGGCCAAGCG CGAGCATGCG CTCTCGGCGG TCGCGTTGTA CCGCTCGCTC
GGCGGCGGCT GGGATGTGCC CGACGCGGTC ACGGCGGTGT CGTCGAGCAA CTGA
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| Protein sequence | MKPILVKVLA SAALLTLAAC AVQPETHADL PQTVKTVAPA AWNVDAPQDS VSANAWWDQF
GDPVMHQLVE SVLTGNLDVQ AAVERVRQAQ DLAKQNRAAL LPELNASATA SDSRQNTPPP
LGYVRQAGVG LTASWTPDVF GGERLAVLAA QAQVSGRQSA LNEVRLALAA NTAAAYIDLR
WAQSQLQILS DNEQIRARAL KLTQQRLHYG LSTQLDVARA QNQLQDLQAQ IPRVQSAVQH
QLSLIAVYSG RTPESVDSLL LANARDIPVP AQSVPQMLPS EALLQRPDVR TAYATVEQRA
AEVGVSKAQR YPQFRLNLAD GLLASSYLGL PTLTDNLFSA ALNATSPIFN AGRITANIDA
SESRMRESQL GLQQTMLQAL KEIEDNRSDL VSGAVQVQRL GGALDASNQA LHLSSELYKG
GAADFLDVLT AQEAYLRDAE SLNQAKREHA LSAVALYRSL GGGWDVPDAV TAVSSSN
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