| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4417 |
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| Symbol | |
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| ID | 6278300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 479391 |
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| End bp | 480962 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642615510 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_001888163 |
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| Protein GI | 187919132 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.022578 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.743863 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCAAG TTCTCGCCAA CCCCGCCGAC CTGCCGACGC GAATCAAGGT CCTGGCGTTC
ACGTTGATGT GCGTCGGGTT TTTCATGGCG ACGCTCGATA TCCAGATCGT GGCGTCGTCG
CTCAAGGACA TCGGCGGCGG CTTGTCCGCG AGCCAGGACG AACTCTCGTG GGTGCAGACC
TCCTATCTGA TCGCTGAAAT TCTGGTGATC CCGATGTCCG GCTGGCTCAC CCGAGTGTTT
TCCACGCGCT GGGTGTTCGC GTTTTCCGCG CTCGGCTTCA CGGTCACCAG CATGCTGTGC
GGTCTCGCGT GGGACATCAA CTCGATGATC CTGTTCCGCG GCTTGCAGGG CGCGCTCGGC
GCCGCGATGA TCCCGACGGT GTTCACCACC GCATTCGTGC TGTTCCCCGG CAAGCAGCGC
CTGATCGCCT CGACCACCAT CAGCGCGCTC GCCACGCTCG CACCGACCAT TGGTCCGGTG
ATCGGCGGCT GGATCACGTC GCAATGGTCG TGGCACTGGC TGTTCTATCT GAACCTCGTG
CCGGGCCTCG CCGTCACGCT GTTGGTGCCG AAGTACGTGC ACTTCGACAA CGTCGATTTG
TCGCTGCTGA AGAAAGGCGA TTACCTGGGC ATCCTTCTTA TGTCCGGTTT TCTGGGTTGC
CTCGAATACG TGCTGGAGGA AGGGCCGCGC AAGAACTGGT TCGGCGATCA CGTGATCCTG
ACGTGCGCGT GGATCACCGC GATCTGCGGG TTTCTGTTCC TCGTCCATGC GTTCACGGCA
AAAGAACCGA TCGTCGATTT GCGTGCGTTG GCGATCCGCA ACTTCGGTAT CGGCAGTCTG
CTGTCGTTCA TCACCGGGAT CGGGATTTTC TGCGCGGTGT TTCTGACGCC GGTGTTCCTG
TCTCGTGTGC GTGGCTTCGA TTCGTTGCAG ATCGGCGTGG CGTTGCTGTC GGTCGGCTGT
TTTCAACTGG TCGCGATGGT GGTGTATTCG GTGGTCGCGC GCTTTATCGA CATGCGGATT
TTGCTGGTGT TCGGTCTCGT GCTGTTCGGC GTCGGCTGTT ATCTGTATGT GCCGCTGACC
AATCAATGGG GCTGGCACGA GTTGCTGATT CCGCAGGCGT TGCGCGGCAT CGGCCAGCAG
TTCTGCATTC CACCCATCGT GACGATGGCG CTGGGTTCGT TGCCGATGTC GAGGCTGCGT
TCCGCCAGCG GCCTGTTCAA TCTGATGCGT AACCTCGGCG GCGCGATCGG CATTGCGGTA
AGCAGCACGA TGCTCAACGA CCGCCTGAAC CTGCACTACG AGCGGCTCGA TGAACATCTG
AACGTGGGCC GTCCGGTAGT CGAGTCGATC CTGCAGCAGC AAAGCGCGCA TTTCGCCGCA
GTGGGCGGCA ACGTGCTGAA CGCGGCCAAC GCCGGACTCG GTGAATTGCA TGCGTTGCTG
ATGCGTGAAG CGCTCGTGCT CACGTTCTCC GACACTTTCT TCGCCTTGTC ACTGTGTTTC
CTGGTCGGGC TGTTCAGCGT GCTGTTCTCG CGCCCGTTCG GCAACACCGC ACCGCCGCCC
GATGCCCATT GA
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| Protein sequence | MTQVLANPAD LPTRIKVLAF TLMCVGFFMA TLDIQIVASS LKDIGGGLSA SQDELSWVQT
SYLIAEILVI PMSGWLTRVF STRWVFAFSA LGFTVTSMLC GLAWDINSMI LFRGLQGALG
AAMIPTVFTT AFVLFPGKQR LIASTTISAL ATLAPTIGPV IGGWITSQWS WHWLFYLNLV
PGLAVTLLVP KYVHFDNVDL SLLKKGDYLG ILLMSGFLGC LEYVLEEGPR KNWFGDHVIL
TCAWITAICG FLFLVHAFTA KEPIVDLRAL AIRNFGIGSL LSFITGIGIF CAVFLTPVFL
SRVRGFDSLQ IGVALLSVGC FQLVAMVVYS VVARFIDMRI LLVFGLVLFG VGCYLYVPLT
NQWGWHELLI PQALRGIGQQ FCIPPIVTMA LGSLPMSRLR SASGLFNLMR NLGGAIGIAV
SSTMLNDRLN LHYERLDEHL NVGRPVVESI LQQQSAHFAA VGGNVLNAAN AGLGELHALL
MREALVLTFS DTFFALSLCF LVGLFSVLFS RPFGNTAPPP DAH
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