| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4411 |
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| Symbol | |
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| ID | 6279977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 474694 |
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| End bp | 475362 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642615504 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001888157 |
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| Protein GI | 187919126 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
[TIGR03004] ectoine/hydroxyectoine ABC transporter, permease protein EhuC |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTCG ATTTTTCGCC GGTCATTGCC GGCTTGCCGG ACATATTGCA CGGCGCCGTG
GTGACGGTCG AAGTGACCGC CGCTTCGCTC GCGCTGAGTT GCGTGCTGGG CCTACTGATC
GGCATTGGGC GGCTCACGCC GAAACGGCGC ATCGTGTACG GCTTTTGCAC GGCGTACCTG
ACGTTTTTCC GCGGCACGCC GCTGCTGGTG CAGCTGTTTC TGTTGTTCTT CGGCTTGCCG
CAATTCGGCA TTCTGTTGCC GGCGTTTGTG TGTGGCATGT TGGGACTCGG CTTGTATTCG
GCGGCTTACG TTTCGGAGAT CGTGCGTGGC GCGATTCAGT CGGTAGACCG CGGACAGATG
GAAGCGGCGC GCTCCATCGG CATGTCGTCG GGACAGGCCA TGCGCGCGAT CATTCTGCCG
CAAGCCATCG TGCGGATGAT CCCGCCACTC GGCAACGAGT TCATTGCGTT GATCAAGAAC
TCGGCGCTGG TGTCGCTGCT GACCATCGAC GATCTGATGC ATGAAGGGCA GAAGATCATC
AGCGTGTCGT ACCGCTCGCT CGAAGTGTAT CTGGCCATCG CGCTGGTGTA TCTGGTGTTG
ACGCAGGCGA CCAATTACGC GCTGCATCGT GTCGAGCGCC ATTTGCGCGC GGGAGGGATG
GTGCAATGA
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| Protein sequence | MELDFSPVIA GLPDILHGAV VTVEVTAASL ALSCVLGLLI GIGRLTPKRR IVYGFCTAYL
TFFRGTPLLV QLFLLFFGLP QFGILLPAFV CGMLGLGLYS AAYVSEIVRG AIQSVDRGQM
EAARSIGMSS GQAMRAIILP QAIVRMIPPL GNEFIALIKN SALVSLLTID DLMHEGQKII
SVSYRSLEVY LAIALVYLVL TQATNYALHR VERHLRAGGM VQ
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