Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4408 |
Symbol | |
ID | 6279223 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 472018 |
End bp | 472908 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642615501 |
Product | transglutaminase domain protein |
Protein accession | YP_001888154 |
Protein GI | 187919123 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.80946 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCACA CGCCGACCGT GCTGTCCGTC TCGCATCGCA CCACTTATCG CTACTCCACC TTTGTGGAGA CCGCGCAGCA TCTCGCGACG ATCCGGCCGA TTGCCTGTTC ATGGCAGCGC GTGGTCTCGC ACAGCGAAAA GATCGAACCC GAACCGTCGT ATATGAATAG CCGGATCGAC GCATTCGGCA ACGACGTGCT GTATTTCGCG CTGGATGCGC CGCATGAGCG CTTGCAACTT GTCAGCGAAA CCACGGTGGC GCTCATGCCG CGCTGGACCG ATCTCGATCC CGAGGCGACG CCCGCATGGG ACGACGTGGC CGACGCGCTG CGCTTTCGCG TCGGCGGCCG GTTCCGGCCC GAGGCGGAGT TCTGTTTCGC GTCGCCGAAT ATCGTGCCAC GGCCGTCGTT GCGGGACTAT GCGTTGCCGA GTTTTCCGCC CGGCATGCCG GTCGCCGCGG GCGCGATCGA TCTGATGCAC CGCATTCACG AAGACTTCGC CTACAAGCCT TCCGCGACGA TGTTCGATAC GCCGGCCGAA CGCGCCTTCG AATTGAAAAG CGGCGTGTGT CAGGACTTCG CGCAGGTGAT GATCGGCTGC TTGCGCTCGC TGGGTTTGCC TGCGCGCTAC GTGAGCGGCT ATCTGCGCAA CGATCCGCCG CCGGGACAGC CGCGGTTGAT TGGCGCCGAC GCGTCGCACG CGTGGGTGTC CGTGTATTGC CCCGGCAGCG GCTGGATCGA TCTCGATCCG ACCAACGACG TGCTCGCCGA TATGGATCAC GTGACGCTCG CCATCGGCCG CGATTACAGC GATGTCTCGT TGCTGCGCGG GATGATTCTG GGTGGTGGGG CGCATCGGGT GGAAGTGGGG GTGACGGTGC TTGCGCTTTG A
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Protein sequence | MKHTPTVLSV SHRTTYRYST FVETAQHLAT IRPIACSWQR VVSHSEKIEP EPSYMNSRID AFGNDVLYFA LDAPHERLQL VSETTVALMP RWTDLDPEAT PAWDDVADAL RFRVGGRFRP EAEFCFASPN IVPRPSLRDY ALPSFPPGMP VAAGAIDLMH RIHEDFAYKP SATMFDTPAE RAFELKSGVC QDFAQVMIGC LRSLGLPARY VSGYLRNDPP PGQPRLIGAD ASHAWVSVYC PGSGWIDLDP TNDVLADMDH VTLAIGRDYS DVSLLRGMIL GGGAHRVEVG VTVLAL
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