| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4408 |
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| Symbol | |
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| ID | 6279223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 472018 |
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| End bp | 472908 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642615501 |
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| Product | transglutaminase domain protein |
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| Protein accession | YP_001888154 |
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| Protein GI | 187919123 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.80946 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCACA CGCCGACCGT GCTGTCCGTC TCGCATCGCA CCACTTATCG CTACTCCACC
TTTGTGGAGA CCGCGCAGCA TCTCGCGACG ATCCGGCCGA TTGCCTGTTC ATGGCAGCGC
GTGGTCTCGC ACAGCGAAAA GATCGAACCC GAACCGTCGT ATATGAATAG CCGGATCGAC
GCATTCGGCA ACGACGTGCT GTATTTCGCG CTGGATGCGC CGCATGAGCG CTTGCAACTT
GTCAGCGAAA CCACGGTGGC GCTCATGCCG CGCTGGACCG ATCTCGATCC CGAGGCGACG
CCCGCATGGG ACGACGTGGC CGACGCGCTG CGCTTTCGCG TCGGCGGCCG GTTCCGGCCC
GAGGCGGAGT TCTGTTTCGC GTCGCCGAAT ATCGTGCCAC GGCCGTCGTT GCGGGACTAT
GCGTTGCCGA GTTTTCCGCC CGGCATGCCG GTCGCCGCGG GCGCGATCGA TCTGATGCAC
CGCATTCACG AAGACTTCGC CTACAAGCCT TCCGCGACGA TGTTCGATAC GCCGGCCGAA
CGCGCCTTCG AATTGAAAAG CGGCGTGTGT CAGGACTTCG CGCAGGTGAT GATCGGCTGC
TTGCGCTCGC TGGGTTTGCC TGCGCGCTAC GTGAGCGGCT ATCTGCGCAA CGATCCGCCG
CCGGGACAGC CGCGGTTGAT TGGCGCCGAC GCGTCGCACG CGTGGGTGTC CGTGTATTGC
CCCGGCAGCG GCTGGATCGA TCTCGATCCG ACCAACGACG TGCTCGCCGA TATGGATCAC
GTGACGCTCG CCATCGGCCG CGATTACAGC GATGTCTCGT TGCTGCGCGG GATGATTCTG
GGTGGTGGGG CGCATCGGGT GGAAGTGGGG GTGACGGTGC TTGCGCTTTG A
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| Protein sequence | MKHTPTVLSV SHRTTYRYST FVETAQHLAT IRPIACSWQR VVSHSEKIEP EPSYMNSRID
AFGNDVLYFA LDAPHERLQL VSETTVALMP RWTDLDPEAT PAWDDVADAL RFRVGGRFRP
EAEFCFASPN IVPRPSLRDY ALPSFPPGMP VAAGAIDLMH RIHEDFAYKP SATMFDTPAE
RAFELKSGVC QDFAQVMIGC LRSLGLPARY VSGYLRNDPP PGQPRLIGAD ASHAWVSVYC
PGSGWIDLDP TNDVLADMDH VTLAIGRDYS DVSLLRGMIL GGGAHRVEVG VTVLAL
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