Gene Bphyt_4390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4390 
Symbol 
ID6279765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp448782 
End bp450215 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content63% 
IMG OID642615483 
Productheavy metal sensor signal transduction histidine kinase 
Protein accessionYP_001888136 
Protein GI187919105 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR01386] heavy metal sensor kinase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCCGC GTACGCTGCG TGCAAGGCTC ACTGCTCTCA TCATCGTGTC TACGTCGGCG 
ATCCTCGCGC TCAGCGGGCT TGCGCTATAT CACGTGCTGC GCAGTTGCCT CGAGTCGAGC
TCGGTCGAGC AGATGTCCAG CACGATGGCG GCGTTACACA CGCATCTGTC GGGGATTCCG
ACCGTGCATG CCATTGGCGG CAACGCGGAG ACGGTGATCG ACCACCTGCG TGGGCATCCC
CACATGGCGC TTGCCATTTA CGACACAGCG GGCCAGCGCC GCTTGAGCAC GGCGGGCTTC
AAGCCCTATG CGCCGATTGC GGCAATCGTG CTGAACGGTG CGCCTTTGGC GCTCACGCGC
GCCGGTTCGA ATCTTCGATA CCTGCTGCAG CGCGTGGCGC TCAATGGCGG AATCGGACCG
CCGGTGCTGG TCGCCATTCA ATACGACGGC ACCGGCGATG AAGCGCTATT GCGCGTGTAC
GCCTGCACCA CGGTGGCGAT CGAAGTATTG GGTGTGCTGT TAGCCGCCGT GTTCGCATAC
GGTATCGCCC TGGTGGGACT GCTCCCGCTG CGCAGGCTGG TGGCCCGGGC AGAAGCGATG
TCGACGAGCG GTCTCGCGCA ACCGCTGCCG GAATTGCATG CGTCAGGCGA GTTGAAGGAA
CTGGAGCAGG CCTTTAACGG CATGCTCACG CGGCTTGACG AATCGTTCAC CCGGCTAAGT
CAATTCTCAT CCAATCTTGC GCACGATATG CGCACGCCGC TCACTAATCT GCTTGCCGCT
GCTCAGGTGG CGTTGTCACA GCGCCGCAGC GCGGAGGACT ACCGGGACGT TATCGAGTCC
AGTGTGGACG AGTATCGGCG GCTGTCGCAC ATGATCGAAG ACATGCTGTT CCTGGCGCGT
TCCGATCAGG CTGATGCGCC CCCGTCCTTG CGTTTACTTG ACGCGGTCGC GGAGGCCGAG
CGGGTCGCGG GCTACTACGA GACCGTGGCC GAAGATGCGC AGGTCGAGAT CAAGGTGACG
GGCGAGGGCA CGGTGCTAGC CGATCTGCTG CTCTTTCAAC GCGCGCTCAG CAACCTGCTC
TCGAACGCGC TCGCGCAGGG GCCGCCAGGA ACCACCATTA TCATCGACTG CAAGGAGGAG
CCGGACTGGA CCACGCTGAG TGTGTCGGAT TCGGGCGCGG GAATCGAAGC TCGCCATCTC
GAACGCATAT TCGAGCGGTT CTATCGTGTG GATCCTTCGC GGCACGGTTC GGCATCGGGC
ACGGGGCTGG GCCTCGCCAT CGTGAAATCG ATCATGACGA GCCACGGGGG GCAGTGCGGC
TGCGAAAGCC GGCCACATGT GCGCACCTGT TTCTGGCTGC GCTTTCCGAA CCATGATTGC
TCAAGTCACG GCATGGCGGC GCGCCCAGGA CGCGACGCCG TACGCAAAGC GTGA
 
Protein sequence
MVPRTLRARL TALIIVSTSA ILALSGLALY HVLRSCLESS SVEQMSSTMA ALHTHLSGIP 
TVHAIGGNAE TVIDHLRGHP HMALAIYDTA GQRRLSTAGF KPYAPIAAIV LNGAPLALTR
AGSNLRYLLQ RVALNGGIGP PVLVAIQYDG TGDEALLRVY ACTTVAIEVL GVLLAAVFAY
GIALVGLLPL RRLVARAEAM STSGLAQPLP ELHASGELKE LEQAFNGMLT RLDESFTRLS
QFSSNLAHDM RTPLTNLLAA AQVALSQRRS AEDYRDVIES SVDEYRRLSH MIEDMLFLAR
SDQADAPPSL RLLDAVAEAE RVAGYYETVA EDAQVEIKVT GEGTVLADLL LFQRALSNLL
SNALAQGPPG TTIIIDCKEE PDWTTLSVSD SGAGIEARHL ERIFERFYRV DPSRHGSASG
TGLGLAIVKS IMTSHGGQCG CESRPHVRTC FWLRFPNHDC SSHGMAARPG RDAVRKA