| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4389 |
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| Symbol | |
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| ID | 6280145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 448093 |
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| End bp | 448773 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642615482 |
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| Product | two component heavy metal response transcriptional regulator, winged helix family |
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| Protein accession | YP_001888135 |
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| Protein GI | 187919104 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR01387] heavy metal response regulator |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGGATTC TGCTGGTGGA AGATGAGCCG AAGACCGGCG CCTATTTGCG AAAGGGCTTG
TCTGAGGCGG GATACGTGGT CGACTGGGCG CAAAACGGTG TGACGGGCCA GCATCAGGCG
GAGACGGAAG ACTACGACCT GCTGATCCTC GATGTAATGT TGCCGGGACA GGACGGTTGG
ACGCTGCTGC AAAACCTGCG CCGCAAACGG TGCACGCCGG TGCTGTTTCT CACCGCGCGC
GACGACGTGG GAGACCGCGT CAAAGGCCTG GAGCTCGGCG CCGACGACTA CCTGGCGAAG
CCGTTCGACT TCGTCGAACT GATCGCACGC GTGAGGTCGA TCCTGCGGCG TGGCAAGCCA
CGCGAATTCA CGTTGCTGAA GGTCGCCGAT CTCGAACTGG ATCTGACGCG GCGTAAGGCG
ACCCGGCAGC ACGACGTGAT TTTGCTCACC GCCAAGGAAT TCACGCTGCT GTGGCTGCTC
ATGCGCAAGG AAGGGGAAAT CCTGCCGCGC GCTACGATCG CCTCGCAAGT GTGGGACATG
AACTTCAACA GCGACACGAA CGTGGTCGAT TCGGCAATCC GGCGACTGCG CTCCAAGATC
GACGACGCCT ACGAACCCAA GCTGATTCAC ACCGTGAGAG GCATGGGGTA TGTGCTGGAA
AACCGGGGCG CCGGCAATTG A
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| Protein sequence | MRILLVEDEP KTGAYLRKGL SEAGYVVDWA QNGVTGQHQA ETEDYDLLIL DVMLPGQDGW
TLLQNLRRKR CTPVLFLTAR DDVGDRVKGL ELGADDYLAK PFDFVELIAR VRSILRRGKP
REFTLLKVAD LELDLTRRKA TRQHDVILLT AKEFTLLWLL MRKEGEILPR ATIASQVWDM
NFNSDTNVVD SAIRRLRSKI DDAYEPKLIH TVRGMGYVLE NRGAGN
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