| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4364 |
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| Symbol | |
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| ID | 6278715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 418298 |
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| End bp | 419728 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642615458 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001888111 |
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| Protein GI | 187919080 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | [TIGR01773] gamma-aminobutyrate permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.590232 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCGAT CTACAGACAC AACGGAATTG AAGGCGGGCC TCAAACAGCG CCACATGACG
ATGATCGCGC TCGGCGGCGT GATCGGCGCG GGGCTCTTCG TCGGCAGCGG CGTGGTCGTG
CAGCAGGCTG GCCCCGCCGC GGTGCTGTCG TTTCTGATCA CCGGCGCGCT GGTCGTGCTG
GTCATGCGGA TGCTCGGCGA AATGGCCTGC GCGATGCCGG CCGTCGGTTC GTTCTACGAA
TACGCGCGGC TCGCGTTCGG CGGCAAGCGC GCGTCCGGCA ACCTCGCCGG TTTTCTGACC
GGCTGGATGT ACTGGTATTT CTGGGTCATC GTCGTCGCGG TGGAGGCCGT GGCCGGGGCG
AAACTCGTGC AGTTTTGGCT ACCGGACGTT CCCGCGTGGG CGATCAGTCT CGTGTTGCTG
GTCACGCTCA CGGCGACCAA CCTGGTCTCG GTCGGCAGCT ACGGTGAATT CGAGTTCTGG
TTCGCGTCGA TCAAGGTCGC GGCGATCATG GTGTTCCTGT TTCTCGGCGG CATGTATGTG
CTGGGACTGT GGCCCGCGGC GAAGCACGTC ACCGCCGTTC TGCCGACGCT GCTTTCGCAC
GGCGGCTTGA TGCCGAAGGG AATCGGACCC GTGCTGAGCG GCGCGGTTGC GGCCACGGGC
TTTTACTTCG GCGCGGAGAT CGTCACGATC GCGGCGGCCG AAGCGCAGGA GCCCGCCAAA
GCCGTCGCCA AAGCGACGAA CTCGGTGATC ACGCGCGTGC TGGTTTTTTA TGTCGGCTCG
ATCCTGCTCG TCGTCGCGCT GGTGCCGTGG AATTCCCCGA AGATGGCGAC GCCGTATGTG
AGCGCGCTCG ATGCCATGGG TATTCCCGCC GCCGCCAGCG TCATGAATGC CATCGTGCTG
ACCGCGGTGC TGTCTGCGCT CAATTCAGGC CTCTATGCCG CGTCGCGGAT GATCTTCGCG
CTGACACGCC ACGGCGACGC GCCCGCCGCA CTCGCCAAGG TCAATCGTCG CGGCGTGCCG
GTTCGGGCGA TTCTGATCGG CACCGTGTTC GGCTATGCGT CGGTGGTGAT GTCGTACGTG
TCGCCGGATA CGGTTTTCGC CTTCCTCGTG AATTCGTACG GCACGGTGGC GATTTTCGTC
TACGTGCTGA TCGCGATCTC GCAATTGAAA CTGCGCGCTC GCATCGAACG GGATGCGCCG
GAGAAGCTGC GCGTCCGGAT GTGGTGCTAC CCGTACCTCA CGTGGGTCGC GATCATCGGC
ATGGTCGGCA TTCTGGTGGC GATGGCGTTC ATTCCCGAGC AACGTCAACC GTTGTGGTTC
GGAGTCGCGA GCCTAGGCGT GTTGCTGCTC GCTTATCTGC TGCGCGTCCG TAAACCCGAT
GCCGGGTTCG GCGAACCGGA CACGCTGGAA TACCGGCATC ACCATCACTA A
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| Protein sequence | MQRSTDTTEL KAGLKQRHMT MIALGGVIGA GLFVGSGVVV QQAGPAAVLS FLITGALVVL
VMRMLGEMAC AMPAVGSFYE YARLAFGGKR ASGNLAGFLT GWMYWYFWVI VVAVEAVAGA
KLVQFWLPDV PAWAISLVLL VTLTATNLVS VGSYGEFEFW FASIKVAAIM VFLFLGGMYV
LGLWPAAKHV TAVLPTLLSH GGLMPKGIGP VLSGAVAATG FYFGAEIVTI AAAEAQEPAK
AVAKATNSVI TRVLVFYVGS ILLVVALVPW NSPKMATPYV SALDAMGIPA AASVMNAIVL
TAVLSALNSG LYAASRMIFA LTRHGDAPAA LAKVNRRGVP VRAILIGTVF GYASVVMSYV
SPDTVFAFLV NSYGTVAIFV YVLIAISQLK LRARIERDAP EKLRVRMWCY PYLTWVAIIG
MVGILVAMAF IPEQRQPLWF GVASLGVLLL AYLLRVRKPD AGFGEPDTLE YRHHHH
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