Gene Bphyt_4354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4354 
Symbol 
ID6277593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp408334 
End bp409197 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content64% 
IMG OID642615448 
ProductNmrA family protein 
Protein accessionYP_001888101 
Protein GI187919070 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATGCAA TCACAGGGAT AACAGGGAAG GTCGGCGGCG CGGTAGCGCG CACGTTGCTC 
GCCGCGGGCC AGCCGGTGCG CGCGGTTGTA CGCGATGCCA CCCGGGCACG CTCGTGGGCT
GAACGCGGAT GTGAAGTGGT GACCGCCAAC ATGGACAATG CGGGCTCGCT TACCGCCGCT
TTCGAGGGCA CGCAAGGCGT CTTCATTCTG CCGCCGCCGG AGTTCGATCC GTCGCCCGGC
TTTCCCGAGG CGCGCGCTGT CATTGACGCC GTGCGCGGTG CGCTTCAATC GGTGGCGCCC
GGCAAGGTGG TTTGCCTGTC GACGATCGGC GCGCACGCCA CCGAAACCAA TCTGCTCACG
CAACTTACGC TGATGGAGCA GGCGCTTCGC GATTTGCCGA TGCCCGTGAC TTTTTTGCGT
CCCGGCTGGT TCATGGAAAA CGCCGCATGG GACGTTGCGC CGGCGCGGGA CAACGGAGTG
ATCTCCAGCT TTCTGCAACC GCTCGACAGG GCTGTGCCGA TGGTCGCGAC CGCGGACGTC
GGTCGCGTTG CCGCGCAACT GCTTCTGCAG ACCTGGCGCG GCGTGCGTGT CGTCGAGTTG
GAAGGGCAAC GCGTGAGCCC GAACGATCTG GCGCAGACAT TTGCCAAGGT GCTCGGTTGC
CCGGTTCGTG CGGAGGCGGT GCCGCGCGAA ACATGGGACG CGCTGTTTCG ATCTCAAGGT
ATGAAGGAGC CGTTGCCGCG TATGCGCATG CTCGACGGAT TCAATGAAGG CTGGATCTGT
TTTGAGGGCG ACCCAGCCGA CATCGTCAAG GGCGAAGTGG AGCTGGAGAC CGTTCTGCGA
GATCTCGTCT CGCAGTCGGT CTAA
 
Protein sequence
MYAITGITGK VGGAVARTLL AAGQPVRAVV RDATRARSWA ERGCEVVTAN MDNAGSLTAA 
FEGTQGVFIL PPPEFDPSPG FPEARAVIDA VRGALQSVAP GKVVCLSTIG AHATETNLLT
QLTLMEQALR DLPMPVTFLR PGWFMENAAW DVAPARDNGV ISSFLQPLDR AVPMVATADV
GRVAAQLLLQ TWRGVRVVEL EGQRVSPNDL AQTFAKVLGC PVRAEAVPRE TWDALFRSQG
MKEPLPRMRM LDGFNEGWIC FEGDPADIVK GEVELETVLR DLVSQSV