| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4348 |
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| Symbol | |
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| ID | 6278333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 402574 |
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| End bp | 403284 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642615442 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001888095 |
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| Protein GI | 187919064 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.823656 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGT CGCAGAAGGT TGTCGTCGTT ACCGGCGCGT CGCAAGGCAT CGGCGCCGAA
GTCGTCAAGG CGTTTCGCAA GCTCGACTAT CGCATTGTCG CGAACTCACG GTCGATCAAG
CCGTCCGACG ACCCGAACAT CCTCTGCATC GCCGGCGATA TCGGCGACCC GGCAACCGCC
CGTCGCGTCA TTACCGAAGG CGTCGCGCGA TTTGGCCGGA TCGACACGCT GGTGAACAAC
GCCGGCATTT ATATCGGCAA GCCTTTCACC GAACACACCG CGCAAGACTA CGCCGCGGTG
GTGAACGTGA ATATGACGGG CTTCTTCCAT ATCACGCAGC TAGCCGTCGC CGAAATGGAA
AAGCATTCGA GCGGTCACGT GGTCAGCGTC ACCTCCAGCA CCGCCGACAA CGCGATCAGT
GGCGGATACT CGGTACTGGC AGCCCTGACG AAGGGTGGTC TGAACGCCGC CACGAAGTCG
CTGGCGATCG AGTACGCGAA GAAAGGGATT CGCGTGAACG CCGTCGCGCC GGGGATCATC
AAGACGCCGA TGCACGCGCC GGAAACCCAT GAAGCGCTGG GTGCCTTCCA TCCGCTCGGG
CACATGGGCG AGGCGAGCGA TATCGCCGAT GCGATTCTGT TCCTCGATAC CGCACCGTTC
ATCACGGGAG AAATCCTGCA CGTGGACGGT GGCCAGAGCG CCGGTCGTTA A
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| Protein sequence | MSKSQKVVVV TGASQGIGAE VVKAFRKLDY RIVANSRSIK PSDDPNILCI AGDIGDPATA
RRVITEGVAR FGRIDTLVNN AGIYIGKPFT EHTAQDYAAV VNVNMTGFFH ITQLAVAEME
KHSSGHVVSV TSSTADNAIS GGYSVLAALT KGGLNAATKS LAIEYAKKGI RVNAVAPGII
KTPMHAPETH EALGAFHPLG HMGEASDIAD AILFLDTAPF ITGEILHVDG GQSAGR
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