| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4345 |
|---|
| Symbol | |
|---|
| ID | 6278231 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 399976 |
|---|
| End bp | 400737 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642615439 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001888092 |
|---|
| Protein GI | 187919061 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3967] Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.120533 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTCA GCGGAAATAC GATCTTTATT ACCGGCGGCA CCTCGGGTAT CGGCCGGGCA
CTTGCAGAGG CGTTTCATCG TAAAGGCAAC AAGGTGATCG TCAGCGGACG CCGCAAGGCC
TTGCTGGATG ACGTCGCCAA CACAAATCCG GGCATCGACA CAGTAGAGCT CGATGTCGAT
GACCCGGCGC AAATTCAAAA TGTCGCGAAT GAGTTGATCA CGAAATATCC GTCGCTCAAT
GTCGTCATCA ACAATGCGGG AATCATGCCG TTTGACGATG TAACCGGCCC CTTCGACGAC
GCGCAGGCGG TGCATTTAAT CAACACCAAT CTGCTGGGAC CCGCGCGGAT CAGCGGTGCA
TTCGTCGAAC ACCTCAAGAC ACGACCGGAG GCGGTCATCA TCAACAATAG CTCGGTTGTC
GCGTACATTC CGATGGCAAT GGCGGCACTC TACTCGGCAA CCAAGGCCGC CATTCACTCG
TACTCGCTTT CTCAGCGTTT TGCGTTGCGC GAGACTTCCG TTCGCGTGTT GGAGATTGCC
CCGCCTTGGG TTGACACAGA TCTTGTCCAT AAGAGCGGCG ATCCGCGAGC GATGCAAGTC
GAGCCGTTCA TCGCGGAGAT AATGGCGCTT CTCGAAAGCG CGACGACTGA AGTCGTCGTA
GAAGCCGCCA GGCAGTTGCG GACCAGTGCG GGACCGAACG AGCACGGCAT TGTGGATTAT
TTCAATCAGA TGATTTTAGA TAACCCGCTG CCGACTCCCT GA
|
|---|
| Protein sequence | MKLSGNTIFI TGGTSGIGRA LAEAFHRKGN KVIVSGRRKA LLDDVANTNP GIDTVELDVD
DPAQIQNVAN ELITKYPSLN VVINNAGIMP FDDVTGPFDD AQAVHLINTN LLGPARISGA
FVEHLKTRPE AVIINNSSVV AYIPMAMAAL YSATKAAIHS YSLSQRFALR ETSVRVLEIA
PPWVDTDLVH KSGDPRAMQV EPFIAEIMAL LESATTEVVV EAARQLRTSA GPNEHGIVDY
FNQMILDNPL PTP
|
|---|
| |