| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4332 |
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| Symbol | |
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| ID | 6279186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 385978 |
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| End bp | 389601 |
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| Gene Length | 3624 bp |
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| Protein Length | 1207 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642615426 |
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| Product | Isoquinoline 1-oxidoreductase., Gluconate 2-dehydrogenase (acceptor) |
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| Protein accession | YP_001888079 |
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| Protein GI | 187919048 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
[COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGGC CGGATTTCAG CGTCGATCGA CGCAGCGCAC CGCCGTCGCG GCAGCAGCTC
TACGATGCGC AGAGCGTGCT GATCGTCACG CGCGCGCCGC AGGCGCCGGT GAAGCCGGCG
ATCGGGCAGC CGGGCTCGCG CTCATCGTTC GTGCCGACTG AGGCGGACAT GTTTCTCGTG
GTGCGCGATG ACGGCAGCGT GGTCGCGTTC AACGGTCACG TCGATCTGGG CACGGGCATC
GGCACGGCGC TCGCGCAGAT CGTCGCGGAA GAACTGGATG TGCCGTTGAC GCGCGTGTCG
ATTGTGCTCG GCCACACGCG TGAAGCGCCG AATCAGGGGC CGACGATTGC CAGCGCGACG
ATTCAGATTT CGGCGGTGCC GTTGAGGCAC GCTGCGGCGC AGGCGCGGCA ATTTCTGCTG
GCGGAAGCGG CGGCGCGCTT CAATGTGAGC GTCGAGCAAC TCGATGTGCG TGATGGCGTC
GTTTATCGAC GTGACGGCGG CGCGGCTGCG AAAGGCATTG GCTACGGCGA GTTGATTAGC
GGAAAACGCG TCGAATTGCA GCTCGCCACC GATGCGCCGT TGAAGTCGCC GGACACGTAC
AAGATCGTCG GCAAGAGCAC GCCGCGCGTC GATATTCCGG CGAAGGCAAC GGGCGAATTG
AGTTTCGTGC ACGACGTCCG CGTGCCCGGC ATGTTGCATG GACGTGTGGT GCGGCCGCCG
TACGCCGGTG TCGCGCAAGG CGACTTCATG GGCAATAGTC TGCTGCAGGT GGATGAAGAC
TCGGTTAGCG AATTGCCCGG CATCGTCAAA GTGGTAGTGA TTCGCGATTT CGTCGGCATC
GTGGCTGAGC GTGAAGAAGT CGCGCAGCAG GCCGCGAAGC GGCTTCGCGT GCAATGGAAA
GAGGTAGAAG GTTTGCCGTC GCTCGAAACC AGCGAGGAAG TGGAAGCGGC GTTGCGCGCG
AATCCCGCCA AGCGGCGCGA TCTGGTGATC GAAGGCGATG TCGATGCAGC GCTCGCGCAA
GACTCCGCCC GCACGCTGGA ACGCACCTAC GTATGGCCGT TTCAGATGCA TGCGTCGATT
GGGCCTTCTT GCGCGGTGGC CGATTATCGC GAAGGCGCTT TGAAGGTCTG GTCGGGCACG
CAGAACCCGC ATTCGTTGCG CGCCGATCTT GCTCTGCTGA TGAGTATGGA CGAAGCGCAC
ATCGAAATCG TGCGGATGGA AGCGGCGGGC TGCTACGGCC GCAATTGCGC GGACGATGTC
GCCGCCGACG CCGCATTGCT TTCGCGCGCC ACCGGCAGTC CGGTGCGCGT TCAACTCTCG
CGCGAAGACG AGCACGCGTG GGAACCGAAA GGCGCCGCGC AATTGATGGA CGTGCGCGGC
GCGCTGAATG CCGAAGGCGA ACTGGCGGCC TACGACTTTG CGACGCGTTA TCCGTCCAAC
GATGCGCCGA CGCTGGCATT GCTACTGACG GGCACAATTT CCGCGCAGCC ACAGGTGTTC
GAAATGGGCG ACCGCACGGC GGTGCCGCCG TACGATTACC GCAGCATGCG CATCGTCTGC
GACGACACGC CGCCGATCGT TCGGGCGTCG TGGTTGCGCG GCGTGTCCGC GTTGCCGAAT
ACGTTCGCGC ACGAGTCCTT CATCGATGAA CTCGCGGTGG AAGCGGGCAT CGATCCGGTC
GAGTTTCGCC TGAAGCATCT GACCGATCCG CGAGCGATCG AACTGGTCAA AGCGGTCGCG
GAAAAAGCTG GCTGGGAAGC ACGCAGCGCC GAGCGCAACG CCGAGCTTAA AGATGAGGAA
GGCGACATCG CACGCGGGCG CGGCATCGCT TACGCCCGCT ACGTGCACAG CAAATTTCCC
GGCTTCGGTG CGGCATGGTC CGCATGGGTG GCCGATGTCG AAGTGAATCG CAAGAGCGGC
GATCTCGCGG TGACGCGCGT GGTGGTCGGC CAGGACACCG GCACGATGGT GAATCCCGAC
GGCGTGCGTC ATCAGATTCA CGGCAACGTG ATCCAGACGA CCAGCCGTGC GTTGAAAGAG
CGCGTGACGT TCGGCGAGAA CGCAGTGACG AGCCAGGAGT GGGGCGCGTA TCCGATCCTC
ACCTTCCGCG AAGTACCCGT GATCGACGTG GTGATGATGC CGCGCCACGG CGAGCCGCCG
ATGGGCGCGG GCGAATCCGC GTCGCTGCCC GGCGCGGCGG CGATTGCCAA TGCGCTCTTC
GATGCCACGG GCGTGCGTTT TCGCCGGCCG CCGTTCACGC CGGAAACGAT CCGCGCCGCG
CTCGCCGATG CGCAAGCCGA AGACAAGGCG GCGCGCAGGA AGAAGCGCTG GCGGTTTGGG
TTTTTAGGCG CGTTGGCGGC AGGAGCGGCG GGTTGGCTCG GCGCATTGTC GCTCGCGCCG
CACGCTATCG CGCCGATCAC GCCGCCGCTG GCGAGCGCGT TCGCGCCGGA GCTCGTGGCG
CGCGGCAAGC TGCTGGCATC GCTCGGCAAC TGCGCGGTTT GCCACACCGC GCACAACGGC
GTGCCGAACG CCGGCGGCAA ACCGCTCGAT ACGCCGTTCG GCACCGTGTA CAGCACCAAT
ATCACGCCGG ACGGTCAGAC CGGCATCGGC AACTGGTCGC TCGAAGCCTT CGTGCGGGCG
ATGCGGCAAG GCATCAGCCG CGATGGCCAT CGCCTGTATC CGGCCTTTCC GTACACCTCG
TTCCAGAACA CTTCCGACGA CGATCTCAAA GCGCTGTATG CCTATCTGAT GGCGCAAACG
CCGGTGCGCT CACATCCGCC GGAAACGAAG CTCGCGTACC CGTTCAGCGT GCGTCCGCTG
ATGTCTGCCT GGAACGCTCT ATTTCTCGGG CGCACGACGT TCACCGCCAG CACGACGCAA
ACCGCGCAAT GGAATCGCGG CGCGTATCTG GTGAACGGAC TCGGCCATTG CGGCGCGTGC
CACACGCCGC GCAATGCATT TGGCGCCGAG AAAACCGGTG CGGCGTTCAT GGGCGGCGGC
ATGGCGGACG GCTGGGAAGC GCCCGCGTTG TCGGCGCTCT CGACCGCACC CGTGCCCTGG
AGCGAGGACG AACTTTTCAG CTACTTGCGC AATGGTCACG CGCCGCTGCA CGGCGTCGCG
GCCGGGCCGA TGGCGCCGGT CGTCGGCGAT CTGGCGGCGC TGCCCGACAG CGATATTCGC
GCGATGGCCA CGTATCTCGC GTCGCTCAAT CCGTTGGAAC CGAACGCCGA TCCCGTAGCG
ATGGCGCGTC AGTATGAACA GGCCAGCGCA ATCTCGGGCG CGCCAGCGGG CCTCGGCGCG
CGGCTTTTCG ACGGCGCGTG CGCCGCATGT CATCACACGG GTGGCGGGCC GCAGTTGTTC
GGCGCGCATC CTTCGCTGGC GCTCAACACG AATCTGCACA GCGCGACGCC CGATAATCTG
ATTCGCGTGA TTCTCGACGG CATCGGCTCG CCTGCGCGGC CCGAACTCGG TACGATGCCG
GCTTACCGCG ACAGTTTCAA CGACGTCCAG GTCGCCGAAC TCGTGTCGTA CCTGCGTCAG
CAATTCGCCG GTGGCAAGCC CGCATGGCAG GACGTCGCGG CGAGGGTCGC CAGGATTCGC
GCGACGCCGC GGCGGGCCGA CTGA
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| Protein sequence | MTGPDFSVDR RSAPPSRQQL YDAQSVLIVT RAPQAPVKPA IGQPGSRSSF VPTEADMFLV
VRDDGSVVAF NGHVDLGTGI GTALAQIVAE ELDVPLTRVS IVLGHTREAP NQGPTIASAT
IQISAVPLRH AAAQARQFLL AEAAARFNVS VEQLDVRDGV VYRRDGGAAA KGIGYGELIS
GKRVELQLAT DAPLKSPDTY KIVGKSTPRV DIPAKATGEL SFVHDVRVPG MLHGRVVRPP
YAGVAQGDFM GNSLLQVDED SVSELPGIVK VVVIRDFVGI VAEREEVAQQ AAKRLRVQWK
EVEGLPSLET SEEVEAALRA NPAKRRDLVI EGDVDAALAQ DSARTLERTY VWPFQMHASI
GPSCAVADYR EGALKVWSGT QNPHSLRADL ALLMSMDEAH IEIVRMEAAG CYGRNCADDV
AADAALLSRA TGSPVRVQLS REDEHAWEPK GAAQLMDVRG ALNAEGELAA YDFATRYPSN
DAPTLALLLT GTISAQPQVF EMGDRTAVPP YDYRSMRIVC DDTPPIVRAS WLRGVSALPN
TFAHESFIDE LAVEAGIDPV EFRLKHLTDP RAIELVKAVA EKAGWEARSA ERNAELKDEE
GDIARGRGIA YARYVHSKFP GFGAAWSAWV ADVEVNRKSG DLAVTRVVVG QDTGTMVNPD
GVRHQIHGNV IQTTSRALKE RVTFGENAVT SQEWGAYPIL TFREVPVIDV VMMPRHGEPP
MGAGESASLP GAAAIANALF DATGVRFRRP PFTPETIRAA LADAQAEDKA ARRKKRWRFG
FLGALAAGAA GWLGALSLAP HAIAPITPPL ASAFAPELVA RGKLLASLGN CAVCHTAHNG
VPNAGGKPLD TPFGTVYSTN ITPDGQTGIG NWSLEAFVRA MRQGISRDGH RLYPAFPYTS
FQNTSDDDLK ALYAYLMAQT PVRSHPPETK LAYPFSVRPL MSAWNALFLG RTTFTASTTQ
TAQWNRGAYL VNGLGHCGAC HTPRNAFGAE KTGAAFMGGG MADGWEAPAL SALSTAPVPW
SEDELFSYLR NGHAPLHGVA AGPMAPVVGD LAALPDSDIR AMATYLASLN PLEPNADPVA
MARQYEQASA ISGAPAGLGA RLFDGACAAC HHTGGGPQLF GAHPSLALNT NLHSATPDNL
IRVILDGIGS PARPELGTMP AYRDSFNDVQ VAELVSYLRQ QFAGGKPAWQ DVAARVARIR
ATPRRAD
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