Gene Bphyt_4330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4330 
Symbol 
ID6279188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp384232 
End bp385431 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content64% 
IMG OID642615424 
Productamidohydrolase 
Protein accessionYP_001888077 
Protein GI187919046 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1228] Imidazolonepropionase and related amidohydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCAG AGACGTTGAC AGGCTTGTCG GGCAAGGTCG CGGTAACCAA CATCGGGCTG 
CTGTTATCGG GCGACATCGA CCAGCCGATT CTCGACGCGG ACACGCTCGT GATCGACGAC
GGCGTGATCG TCGCGGTCGG CAAGGAAAAG GACTGCGATC TCGAAGGCGC GCGCACGACG
GTGGATTGCA AAGGCACGAC GGTGGCGCCC GGTTTGATCG ACTCGCATGT GCATCCCGTG
TTCGGCGACT GGACGCCGCG GCAGAATCAG ATGGGCTGGA TCGAGTCGAA TCTGAATGGC
GGCGTCACCA CGATGATTTC CGCCGGCGAA GTGCATTTGC CCGGCCGCCC GAAAGACGTG
CTCGGCGTGA AGGCGCTTGC GATTACCGCG CAACGTTCGT TCGAAGGCAT GCGCGGCGCC
GGTGTCGGCG GCGGCGTGAA GGTGATGGCG GGCGCGCCGG TGATCGAGAA GGGCATGGTC
GAAGAGGACT TCAAGGAGTT GTCCGAAGCC GGCGTGAAGC TGCTCGGCGA AATCGGCCTC
GGCAGCGTGA AAGGCGGCGA GGAAGCCGCG CAAATGGTCG CGTGGGCACG CAAGTACGGC
ATTCAGAGCA CGATTCACAC AGGCGGTCCG TCGATTCCCG GCTCGGGCCT GATCGATCGC
GACGTGGTGC TCGCGGCCGA TGCGGACGTG ATCGGCCACA TCAACGGCGG GCATACGTCG
CTTTCATACC GGCATGTTTG CGATCTGTGC GAGCAGTCGA GCCGCGCGCT GGAAATCGTC
CACAACGGCA ACGAACGGAT CGCTTTGCTG ACCGCGCGTC ATGCAATCGA ATTGAAGTGC
CCGCACCGGA TCATCCTCGG TACCGATAGT CCTGCCGGTT CCGGCGTGCA GCCGCTCGGC
ATCTTGCGCA TGATCGCGCT GATTTCGAGT CTCGCCGACG TGCCCGCGGA AATCGCCTTC
TGCTTCGCGA CCGGCAACAC CGCGCGTCAG CGCAATCTGC GCCAGGGGCT GATTGAAGTG
GGCCGTCCCG CCGACCTCGT GTTCATGGAT CGCGCACAAC ATACGGCGGC CGATACGCTG
CTCGAAAGCG TGCAACTCGG CGATATTCCG GGCGTGGGCA TGGTGATGAT CGACGGTCTG
ATCCGCTGCC GGCGCAGCCG TAATACCCCG CCGGCTACCG AAGTGCCGGT GGTGCTGTGA
 
Protein sequence
MAAETLTGLS GKVAVTNIGL LLSGDIDQPI LDADTLVIDD GVIVAVGKEK DCDLEGARTT 
VDCKGTTVAP GLIDSHVHPV FGDWTPRQNQ MGWIESNLNG GVTTMISAGE VHLPGRPKDV
LGVKALAITA QRSFEGMRGA GVGGGVKVMA GAPVIEKGMV EEDFKELSEA GVKLLGEIGL
GSVKGGEEAA QMVAWARKYG IQSTIHTGGP SIPGSGLIDR DVVLAADADV IGHINGGHTS
LSYRHVCDLC EQSSRALEIV HNGNERIALL TARHAIELKC PHRIILGTDS PAGSGVQPLG
ILRMIALISS LADVPAEIAF CFATGNTARQ RNLRQGLIEV GRPADLVFMD RAQHTAADTL
LESVQLGDIP GVGMVMIDGL IRCRRSRNTP PATEVPVVL