Gene Bphyt_4310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4310 
Symbol 
ID6280147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp361526 
End bp362164 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content62% 
IMG OID642615404 
ProductGTP cyclohydrolase I 
Protein accessionYP_001888057 
Protein GI187919026 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0302] GTP cyclohydrolase I 
TIGRFAM ID[TIGR00063] GTP cyclohydrolase I 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.208107 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGTA GCAAGGCGAA GAAAACCAAA CCCATAACCG CAACGGAGCG CCCGAGCCGC 
GAGGAAGCTG AAGCAGCGGT TCGTGTGCTG CTGCGTTGGG CCGGCGACGA TCCGGCGCGT
GAAGGTCTGA TCGATACACC GGCGCGCGTG GTGCGCTCGT ACGAGGAGTT TTACGCGGGC
TATCAGGTCG ACCCGCGCGA GATCCTCGCC CGCACCTTCT CCGAGGTGGA CGGCTACGAC
GAAATGATCG TGCTGAAAGA CATCCGCTTC GAAAGCTACT GCGAACATCA CATGGTGCCG
ATCATCGGAC GCGCGCACGT GGCGTATCTG CCGCAACATC GCGTGGTCGG CATCTCCAAG
CTGGCGCGGC TGGTCGATGC GTTCGCCAAA CGCCTGCAGA TCCAGGAAAA GATGACGGTG
CAGATCGCCG ACACCTTGAA CGAAGTGTTG CAACCGGCAG GCGTCGGCGT GATTCTCGAA
GCCGCGCACC AATGCATGTC GACGCGCGGC GTGCACAAGG CCGGCGTGAC GATGGTTACC
TCGCGCATGC TCGGCACGTT CCGCACGGAT CCGTCGACAC GTCGCGAGTT TCTGTCGATC
GTCGGCAATC CGGGGGTGGT GGCGGTCGCT AATACCTAG
 
Protein sequence
MTSSKAKKTK PITATERPSR EEAEAAVRVL LRWAGDDPAR EGLIDTPARV VRSYEEFYAG 
YQVDPREILA RTFSEVDGYD EMIVLKDIRF ESYCEHHMVP IIGRAHVAYL PQHRVVGISK
LARLVDAFAK RLQIQEKMTV QIADTLNEVL QPAGVGVILE AAHQCMSTRG VHKAGVTMVT
SRMLGTFRTD PSTRREFLSI VGNPGVVAVA NT