Gene Bphyt_4308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4308 
Symbol 
ID6280442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp359257 
End bp360294 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content70% 
IMG OID642615402 
Productputative DedA-like transmembrane protein 
Protein accessionYP_001888055 
Protein GI187919024 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.501524 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.760062 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGTAGAAT TTCCGTCTTC GGCGGTGTCG ACCTGGGGTG GCGCGGTCGT ATTCCTCAAC 
GTCCTGTTGA CGCGCCTCGG CGTGCCGATC CCCGCCGTGC CCGTACTGCT GTTCGCAGGC
TCCGCGATTG CCGCCGGCAC GCTGTCGTTC TGGCCGGTCC TCGGCGCCGC CGTGCTCGGC
GCGCTGCTGG GCGACGGCGC ATGGTTCACG GCTGGCCGCC TGTATGGTCG CAAGCTGATC
GCCGCGCTAG GCCGGCTGTC CCCCGCCGTC GATGCCAAAG TGGATAAGGC GCGCGCGCTG
TTCGAGCGCT TCGGCGTGCC GCTCGTGTCG ATCTCGAAGT TCGTCCCAGG ACTCGCGCTC
ATCACGCCGC CGCTGATGGG CACGACCGCC GTCGACGCCC GCATCTACGC CGCTTGGGAC
GTAGCCGGCG CCCTCGCGTG GGCGGCCTTC TGGCTCCTCG GCGGCGCCGC GGCGGAACGG
CAACTGCATA TGCTGCTCGA ATTCGTCAAA GCGCGTGGTG GCACGGTCAT CGACATTTTG
CTGGCCAGCG CGCTCCTCTA TCTCGTCTTC CGTCTGCAGC AACGACGCCG CGAACGCCGC
CGTTTCAGGG AAGCCGCGGC GGCACAGGCC GCCGGCGGCT GGCTCCGTCT CGCGCCGCCG
CCCAAGGTGC TCGATGCCCG TCCGCAGGCG CCCTCGATTG AAGCGCCGTG CCGCATTCCC
GGCGCGCTCG CGCTCGATCC GCACTCGCCG GAGCAGATCG ACGGAGCGCT GCGGGCGCAC
GACACGGTGA TCTACTGCAT TTGCCCGGAC AGCGCGACCG CGGTCGAAAT CACGCAACGC
ATGCGTTACA ACGGCTACAC GCGGATTCGC GCGCTACGCG GCGGCCTCGA TGCCTGGCAG
CGGCGCGGCT TTCCCGTCGA ACCGCTTGCT TTAACCGACG AGCCGGGCAC CGGCAACCGC
GCGGCGGCAT CGCTTGGTGA AGCGCGCGGG GCGATCACGT TGCGGGGCTT CGCGCCGCGC
AGCACGCAAG GCACCTGA
 
Protein sequence
MVEFPSSAVS TWGGAVVFLN VLLTRLGVPI PAVPVLLFAG SAIAAGTLSF WPVLGAAVLG 
ALLGDGAWFT AGRLYGRKLI AALGRLSPAV DAKVDKARAL FERFGVPLVS ISKFVPGLAL
ITPPLMGTTA VDARIYAAWD VAGALAWAAF WLLGGAAAER QLHMLLEFVK ARGGTVIDIL
LASALLYLVF RLQQRRRERR RFREAAAAQA AGGWLRLAPP PKVLDARPQA PSIEAPCRIP
GALALDPHSP EQIDGALRAH DTVIYCICPD SATAVEITQR MRYNGYTRIR ALRGGLDAWQ
RRGFPVEPLA LTDEPGTGNR AAASLGEARG AITLRGFAPR STQGT