Gene Bphyt_4302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4302 
Symbol 
ID6278969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp352770 
End bp353813 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content65% 
IMG OID642615396 
Product2-alkenal reductase 
Protein accessionYP_001888049 
Protein GI187919018 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.519822 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAGCC GCCCACGCTT CGTCGATGAC CTGTCGCGCG CCGCATCCGA CGCCCCCGGG 
CCCGAGACAC TCAATCCTTT TTCCGACGAC GCCCTGCTCG ACGCCTACTC CCGCACCGTA
ATCGGCGCGC TGGAACGCGT TCAGCAAGCA GTCGCCTTCA TTGCCGTCGA ACGGCGCCTG
CCCGGCCAGC CGTCCGGCCG CGGACGCGGT TCGCGCGGCG GCACCGGCTC GGGCTTTCTG
TTTACGCCCG ACGGCTATCT GCTCACCAAT AGTCACGTCG TGCACGGCGC CACCCACATT
ACCGTGACGC TCGCCGACGG CGCGAAATTC GACGCCGATC TGGTCGGCGA CGATCCCGGC
AGCGATCTGG CCGTCCTGCG GATCGGCTCA CCGGAGCCGC TGGCTCATGT CGAACTCGGC
GAATCGTCGA AACTGCGTGT CGGTCAAATT GCGATTGCGG TCGGCAATCC GCTCGGCCTC
GCGCAAACGG TCACGACCGG TGTAGTGTCG GCGCTCGGCC GCTCGTTGCG TTCGAATTCG
GGCCGCATGA TCTACGACGT GATCCAGACC GATGCCGCGC TCAATCCCGG CAATTCGGGT
GGTCCGCTAA TCAATTCGGC GGGCCAGGTG ATCGGCGTGA ATACCGCGAT CATTCCCGGC
GCACAGGCCA TCTGCTTTGC CACCGCAATC GACACCGCCA AGTGGGTCAT CATGCAGATC
TTCGCGCATG GCCGCGTGCG GCGCGCTTAT ATCGGCGTCG CGGGCACGAC CAGGCCGCTG
TCGCGCCGTG TGCAGCGTTA TTTCGGCTTG AGCTCGGAAA GCGGCGTACA TGTCATGGAG
ATCGTCAAAG GCAGCCCGGC CGCGCTCGGC GGTCTGCGCA CCGACGATAC GATCATCGCG
ATCGATACGC AGGCCGTGCA GGACGTGGAC AGTTTGCAGC GCACGCTCGA CGCATCTCGA
ATCGACAGAC CGGTCAATGT GACGGTGTTG CGCGGCGCGC AGCGGCTCGA ATTGACGTTG
ACGCCGGTCG AGCAGGCTAG CTGA
 
Protein sequence
MGSRPRFVDD LSRAASDAPG PETLNPFSDD ALLDAYSRTV IGALERVQQA VAFIAVERRL 
PGQPSGRGRG SRGGTGSGFL FTPDGYLLTN SHVVHGATHI TVTLADGAKF DADLVGDDPG
SDLAVLRIGS PEPLAHVELG ESSKLRVGQI AIAVGNPLGL AQTVTTGVVS ALGRSLRSNS
GRMIYDVIQT DAALNPGNSG GPLINSAGQV IGVNTAIIPG AQAICFATAI DTAKWVIMQI
FAHGRVRRAY IGVAGTTRPL SRRVQRYFGL SSESGVHVME IVKGSPAALG GLRTDDTIIA
IDTQAVQDVD SLQRTLDASR IDRPVNVTVL RGAQRLELTL TPVEQAS