| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4283 |
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| Symbol | |
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| ID | 6277795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 332491 |
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| End bp | 334296 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642615377 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_001888030 |
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| Protein GI | 187918999 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.303865 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGCG CCTGCGGCGT GGCGAAAGAC ATCGTGGAGC AGACGTTGAC GAAGCGAAAG
AAACCCGAAG AACTGCGCAG CCACCGCTGG TACGGCGTGA ACGATCTGCG CTCGTTTGGC
CACCGTTCGC GCACCGCGCA GATGGGCTAT GACCGCGAGG AATACGCCGG CAAACCGGTC
ATTGCGATTC TCAACACGTG GAGCGAGATC AACGCCTGTC ATACGCACTT CAAGCAGCGT
GTCGAGGAAG TGAAGCGCGG CATCTGGCAG GCCGGCGGCT TTCCGGTCGA ACTGCCGGTG
CAGACGCTCT CCGAGCCGTT CCAGAAGCCC ACCACGATGC TGTATCGCAA CTTCCTCGCC
ATGGAAGCCG AGGAAACGCT GCGCTCGTAT CCCGCTGACG GCGTCGTGCT GATGGGCGGT
TGCGACAAGA CCACGCCCGG ATTGCTGATG GGCGCGATCT CGATGGACTT GCCGGCGATC
TTCCTGCCCG CCGGCCCGAT GTTGCGCGGG AACTGGAACG GCGTGACGCT CGGCTCCGGT
TCTGACGTCT GGAAATACTG GGCCGAATTG CGCGCGGGCA CGATCACGCA GGACGACTGG
CAAGGCATCG AAGGCGGCAT TGCGCGCTCG CCGGGGCACT GCATGACCAT GGGCACCGCG
TCGACCATGA CGAGCGCGGC CGAAGCGCTC GGCTTCACGC TGCCCGGTTT CGCGTCGATT
CCCGCAGCGG ATTCGCGCCA TGCGCAGATG GCGGCGAAAA CCGGCAAGCG TATCGTCGAG
ATGGTGTGGG AGGACCTCAA ACCGTCCGAC CTGATCACGG CAGGTTCCGT CGATAACGCC
GTGACCACCT GCCTCGCGCT GTCCGGTTCG ACCAACGCGA TCGTGCATAT GATCGCGCTT
GCGCGGCGTG CCGGCATCGA GTTGACGCTC GATCGCTACG ACGACATCGC GCGCCGCACG
CCGGTGTTGG CGAACGTTCG TCCGACCGGT GCGTATCTGA TGGAGGATTT TTTTTATGCG
GGCGGCTTGC GCGCCTTGCT CGCCGAACTG GGCGAGTTGA TCGACCGTTC GCAGAAAACC
GTCAACGGCC GCACGCTCGG TGAGAATCTC GAAGGCGCGG AGATTTTCAA CGACGACGTG
ATTCGCCGGC GTGACAAGCC GCTGCTGCCC AACAGCGGGC TCGCGGTGCT ACGCGGCAAC
ATCGCGCCCG ACGGCGCTGT GATCAAACCC GGCGCCGCCG AACCACATCT GCTCGTGCAC
ACCGGCCGCG CGGTGGTGTT CAAGGACTAC AACGACATGG CCGCGCGCAT CGACGACGAC
ACGCTCGACA TCGACGAGAA CAGTCTGATC GTGCTTCAGC ACGCGGGGCC GGTCGGCGCG
CCGGGGATGC CTGAATGGGG CCAATTACCC ATCCCGCGAA AATTGCTGCA GAAAGGCGTG
CGCGACATGG TGCGCATATC GGATGCGCGG ATGAGCGGGA CGAGTTACGG CGCGTGCGTG
CTGCACGTCG CCCCGGAGTC GTTCATCGGC GGGCCGTTTG CGTTGGTCGA GAGCGGCGAC
ATGATCGAGC TCGACGTGCC GCGACGCAAA CTCAACCTGC TGGTGACGGA TGATGAACTC
GCGCGCCGCA AAGCTGCATG GGTCAGACCG GCGCCGCGTT TCACGCGCGG CTACGGCGCG
ATGCATCAGG TGCATGTGAT GCAGGCGAAT CAAGGTTGCG ATTTCGATTT CCTGCAACGC
GGCGGCGCGC AAGCTGCACC CGATGCGGAC GTCGCCAAAG ATACGGGCGA GCCGGAGATT
CACTGA
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| Protein sequence | MSRACGVAKD IVEQTLTKRK KPEELRSHRW YGVNDLRSFG HRSRTAQMGY DREEYAGKPV
IAILNTWSEI NACHTHFKQR VEEVKRGIWQ AGGFPVELPV QTLSEPFQKP TTMLYRNFLA
MEAEETLRSY PADGVVLMGG CDKTTPGLLM GAISMDLPAI FLPAGPMLRG NWNGVTLGSG
SDVWKYWAEL RAGTITQDDW QGIEGGIARS PGHCMTMGTA STMTSAAEAL GFTLPGFASI
PAADSRHAQM AAKTGKRIVE MVWEDLKPSD LITAGSVDNA VTTCLALSGS TNAIVHMIAL
ARRAGIELTL DRYDDIARRT PVLANVRPTG AYLMEDFFYA GGLRALLAEL GELIDRSQKT
VNGRTLGENL EGAEIFNDDV IRRRDKPLLP NSGLAVLRGN IAPDGAVIKP GAAEPHLLVH
TGRAVVFKDY NDMAARIDDD TLDIDENSLI VLQHAGPVGA PGMPEWGQLP IPRKLLQKGV
RDMVRISDAR MSGTSYGACV LHVAPESFIG GPFALVESGD MIELDVPRRK LNLLVTDDEL
ARRKAAWVRP APRFTRGYGA MHQVHVMQAN QGCDFDFLQR GGAQAAPDAD VAKDTGEPEI
H
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