Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4280 |
Symbol | |
ID | 6278521 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 329586 |
End bp | 330665 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642615374 |
Product | ABC transporter related |
Protein accession | YP_001888027 |
Protein GI | 187918996 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.212856 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCATC ACTTTGAGCA GTTGCGGCTC GATTCGGTGA GCCGCAGTTT CACGAATGCG GAAGGCCAGG CGATCGCGGC ACTGCGTGGA CTCGATCTGA CCATCCAGCG TGGCGAGTTC ATCGCATTGC TGGGGCCGTC CGGTTGCGGC AAGTCGACGG CGCTCAATTG CATCGCCGGA TTGCAGCCGT TGACGAGCGG CGGCATCTGG CTCGACGACA AACGCATCGA CGTACTGCCG CCGGAGAAGC GCGGCTTCGG CATGGTATTT CAGAACTACG CGCTGTTTCC GCACATGAGC GTGCTCGACA ACGTCGGCTT CGGTTTGAAA ATGCGCGGCA TCGGCAAGAG CGAAGCCGTG CGCCGGGTGC GCGAAGCGTT GCAACTCGTG CAACTAGTCG GGCACGAGCG CAAACTGCCC GGCCAACTCT CCGGCGGCCA GCAGCAACGC GTCGCGATTG CGCGCGCGAT CGTGATCGAG CCGCCGCTGA TCCTGATGGA CGAACCGCTG TCGAATCTCG ACACCAAGCT GCGCATCGAA ATGCGCGCGG AGATTCGCCG CATCCATAGC CAGCTCGAAC GCGCGACACT TTACGTGACG CACGATCAGG ACGAAGCGCT GTCCATGGCC GATCGCATCG TCGTGATGAG GGAAGGCGTG GTGCAGCAGG TCGCCACGCC GAAAGAGGTC TATACGCGGC CGCAGAATCT GCATGTCGCG CGCTTCATGG GCTATCGCAA TGTGGCCGAG TTCGAACTCG AAGGCATGCA AGGCGAAAGC GTGATGGTGA GCGCGCACGG TGTGCGTCTG CTCGGCACGC CGATGGCCGG CTTCAATAGC AAACGCGTGA GCGTCGCGCT GCGTCCCGAG GATATGGAGC GCGCCACGCC CGGTGCGGAG AATGCCTTCG ATGCGTTGGT GACGACCGTC GAATACGGCG GCCGCGATTC GCTGCTGCGC GTGAAGACCG CCTTTGGCGA TATCTGGGCG CGCGTCGGCG GAGAATTCGA AGAAGGCGAG CGCATCAGCC TGCGCGTGCC GCCGTCGCGC ACGCTCGTGT ACGACGCGGA GGCGGTGTGA
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Protein sequence | MKHHFEQLRL DSVSRSFTNA EGQAIAALRG LDLTIQRGEF IALLGPSGCG KSTALNCIAG LQPLTSGGIW LDDKRIDVLP PEKRGFGMVF QNYALFPHMS VLDNVGFGLK MRGIGKSEAV RRVREALQLV QLVGHERKLP GQLSGGQQQR VAIARAIVIE PPLILMDEPL SNLDTKLRIE MRAEIRRIHS QLERATLYVT HDQDEALSMA DRIVVMREGV VQQVATPKEV YTRPQNLHVA RFMGYRNVAE FELEGMQGES VMVSAHGVRL LGTPMAGFNS KRVSVALRPE DMERATPGAE NAFDALVTTV EYGGRDSLLR VKTAFGDIWA RVGGEFEEGE RISLRVPPSR TLVYDAEAV
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