| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4279 |
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| Symbol | |
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| ID | 6278406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 328328 |
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| End bp | 329497 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642615373 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_001888026 |
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| Protein GI | 187918995 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4134] ABC-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.796314 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.290658 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGTTT CAGACAGGTT GGCGCTCAGG CTGGTGTCCG TATGTCTCGC GGCGAGCGCC
GCTTTCGCAT CCGCCGCGCA CGCGGCCGAC CCGGTCACGC TCAATATCGT CGACGTGGCC
GGCGACCTTC AACTCACGCA AAAGGGCTTC GAGGCCTTCA AGGCGAAGTA CCCGAACCTC
GTCGCCAATC TCACCTTCAC GAATGCGCCG GCGCCGCAAC TGCCCGGCAA GATCAAGGCG
ATGCAGGCCG CGGGCCGCTC CGATATCGAT CTCGTGCTGA CCGGCACCGA CGCGCTCGCC
GCAGGCATCG AACAGGGTCT ATGGATGAAG CTGCTGCCTG AGAACGCGGC GGCGTTCCCC
GGCGTGCTCG ACAAATACGC GCCGGGTCCG CGCAAGATGC AGGATCTCGC GCAAGGCTAC
GGGCTCGAAG TCGCGTATAT GCCTGCCGGC CCGCTGCTCG AATACAACCC CGCCAAAGTC
AGCGACCCGC CGAAGACACC CGAACAATTG CTGCAATGGT GCAAGGCGCA TCCGGACAAA
CTGATCTATG CACGGCCGGC AAATTCCGGT CCGGGCCGCA CGTTCCTGAT GGGCTTGCCG
TACGTGCTCG GCGACAAGGA TCCGCAGGAT CCGATTCACG GCTGGGACAA GACGTGGGCC
TTTCTCAAGC AACTGAACGA TTGCATTCCT TACTATCCGG GCGGCACGTC CGCGGTAATG
AAGGAACTCG GCGAAGGCAC GCGCGACATG ACCGTGACCG TAACGGGCTG GGACATCAAT
CCGCGCGCGC TCGGTATCGT GCCGGCCGAA TTCCGCGTGC AGGCCTTCGA CAACATGACG
TGGGTGAACG ACGCGCACTA CATGGTGATT CCGAAAGGCG TGCCGAAGGA AAAAATCGAC
GTGCTCTACA AGCTGATGAA CTTTATGCTC GAGCCGGCGC AGCAGGCCAT GACCTATGAC
GACGGTTATT TCTATCCCGG TCCGGCGATC AAGGGCGTGA GCGTCGAGCA GGCGCCCGCG
CACAGCCAGG ACGTGCTGAA GAAATACGGC CGGCCTGAGT ACGTGAAGCT GCTGGCCGAG
CATCCGCACG TACTGCCGCT GAATGCCGCG GCGATGGTTG CGGCTTTCAA GAAATGGGAC
ACCGAGATCG GCGCGCAGAA GACCAAGTAG
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| Protein sequence | MTVSDRLALR LVSVCLAASA AFASAAHAAD PVTLNIVDVA GDLQLTQKGF EAFKAKYPNL
VANLTFTNAP APQLPGKIKA MQAAGRSDID LVLTGTDALA AGIEQGLWMK LLPENAAAFP
GVLDKYAPGP RKMQDLAQGY GLEVAYMPAG PLLEYNPAKV SDPPKTPEQL LQWCKAHPDK
LIYARPANSG PGRTFLMGLP YVLGDKDPQD PIHGWDKTWA FLKQLNDCIP YYPGGTSAVM
KELGEGTRDM TVTVTGWDIN PRALGIVPAE FRVQAFDNMT WVNDAHYMVI PKGVPKEKID
VLYKLMNFML EPAQQAMTYD DGYFYPGPAI KGVSVEQAPA HSQDVLKKYG RPEYVKLLAE
HPHVLPLNAA AMVAAFKKWD TEIGAQKTK
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