| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4258 |
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| Symbol | |
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| ID | 6277767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 304405 |
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| End bp | 305643 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642615354 |
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| Product | amidase, hydantoinase/carbamoylase family |
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| Protein accession | YP_001888007 |
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| Protein GI | 187918976 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01879] amidase, hydantoinase/carbamoylase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGACT TGCGCATCGA CGGCGAGCGC CTGTGGCGCT CACTGATGGA CCTCGCCGCG
ATCGGGGCCA CCCCCAAGGG TGGCGTGAAG CGGCTGGCGC TGACGGAACT GGATAAGCAG
GGACGCGACC TCGTGGTTTC GTGGGGGCGG GCGGCTGGTC TCGCGATCAC CGTCGATCGA
ATCGGGAATA TCTTCATGCG GCGCGCCGGC ACGGACCCCG ACGCTCCGCC GGTAGCGTCG
GGCAGCCACA TCGACACCCA GCCCACCGGC GGGAAGTTCG ACGGCAACTA TGGCGTGCTG
GCCGCGCTTG AAGTGATGCG CACCCTCGAC GATGCCGGTG TGAAGACCTG CGCCCCGCTC
GAGGTCGCTA TCTGGACAAA TGAAGAGGGG TCGCGTTTCG TGCCCGTGAT GATGGGGTCG
GGCGTGTTCT GTGGCGCGTT TACGCTGGAG CACGCTTATG CGGCGCGCGA CATCGAAGGC
AAGCGCGTGC GCGACGAACT GGAAGCCATT GGCTACCTCG GTGACGAGGA GCCGGGCAAA
CATCCGCTCG GCGCTTACTT CGAGGCGCAC ATCGAGCAGG GCCCCGTACT GGAGGATGAA
GGCAAGGTAA TCGGCGTGGT GCCGGGCGTG TTGGGCCTGT CGTGGTACGA CTGCGAGGTG
AGGGGCATGG AGGCCCACGC CGGCCCAACG CCGATGGCGA TTCGCAAGGA TGCGTTGCAG
GTGGCGACGC GCGTGATGCA GGAGGTGGTG GCCATCGCCA ACCGGTATCC GCCCTATGGA
CGCGGCACGG TGGGCTTCGT GCAGACGTTC CCGAACAGCC GCAACGTGAT TCCGGGCAGC
GTCAAGTTCA GCATCGACCT GCGCAACGTG AACGATGCGC TGCTGAATCA GATGCATGAC
GAGATGCTGG CTTTCATCGA CCGCACGCAG TCGGAAAGCG GCCTGAGCAT CGGCATCGAA
CGTGTGTCGT ACTACCGGCC GTGCGAGTTT CATCCGCAGT GCGTCGATGC TGTGCGCAGA
GCCACCGGTG CGCTGGGCTA TCCGACCATG GACGTGGTCT CGGGAGCCGG TCACGATGCC
GTCTACACCG CTCGCGTGGC GCCGTCGGGG ATGATCTTCG TGCCGTGCAA GGACGGCATC
AGCCACAACG AGATCGAAGA CGCTCGCTCA GATCATCTGG AAGCCGGCTG CAACGTGCTG
CTGCACTCGA TGCTTGAGCG GGCCGGGCAA GTCAGTTGA
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| Protein sequence | MKDLRIDGER LWRSLMDLAA IGATPKGGVK RLALTELDKQ GRDLVVSWGR AAGLAITVDR
IGNIFMRRAG TDPDAPPVAS GSHIDTQPTG GKFDGNYGVL AALEVMRTLD DAGVKTCAPL
EVAIWTNEEG SRFVPVMMGS GVFCGAFTLE HAYAARDIEG KRVRDELEAI GYLGDEEPGK
HPLGAYFEAH IEQGPVLEDE GKVIGVVPGV LGLSWYDCEV RGMEAHAGPT PMAIRKDALQ
VATRVMQEVV AIANRYPPYG RGTVGFVQTF PNSRNVIPGS VKFSIDLRNV NDALLNQMHD
EMLAFIDRTQ SESGLSIGIE RVSYYRPCEF HPQCVDAVRR ATGALGYPTM DVVSGAGHDA
VYTARVAPSG MIFVPCKDGI SHNEIEDARS DHLEAGCNVL LHSMLERAGQ VS
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