Gene Bphyt_4248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4248 
Symbol 
ID6278530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp293291 
End bp294607 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content65% 
IMG OID642615344 
Productaminotransferase class-III 
Protein accessionYP_001887997 
Protein GI187918966 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAAAA GCAGCGGACC CGCCCTTGGG TCCTACTGGA TGCCATTCAC CGCGAACCGC 
GACTTCAAGC AGCATCCACG CATGCTGGTG TCGGCGGAAG GCATGTACTA CAAGGACATC
GACGGCAAGC CGGTGCTCGA CGCCACGGCG GGCTTGTGGT GCGTGCCACT GGGCCACCGT
CAGCCGAAGA TCGTCAAGGC TGTGCAGGAA GCCGTGTCCA CGCTCGACTA TGGTCCGTCG
TTCCAGGTGG GTCATCCGGC CGTGTTCGCG TTCGCCGAAC GCCTGATCGA CTACAGCGGC
AATCGCTTCG GCCAGGTCTT CTTCACCAAC TCAGGCTCGG AGTCCGTCGA TACCGCGCTT
AAGATTGCCA TCGGCTATCA CCGCGCCTGC GGCGACGCGA CGCGTACCCG CCTGATCGGT
CGCGAGCGCG GCTATCACGG CGTCGGCTTC GGCGGCATCT CGGTTGGCGG GATCTCCGCC
AATCGCAGGG GCTTCGGCTC GCTGCTGACT GGCGTGGACC ATCTGCCGCA CACCTACAAC
CTCGAGCACA ACGCTTACAC GCGCGGCGAG CCGACGTGGG GCTCGCATCT GGCCGAGGAT
CTCGAGCGCA TCGTTGCGCT GCACGACGCT TCCACTATCG CCGCCGTGAT CGTGGAGCCG
GTGGCGGGTT CGACCGGCGT GCTGGTGCCG CCAAAAGGCT ACCTGAAACG GCTGCGGGAG
ATCTGCACTG CGCACGGCAT TCTGCTGATC TTCGATGAGG TCATCACCGG CTTCGGCCGC
CTCACCACAC CGTTTGCAGC CGACTACTTC GATGTCGAAC CCGACATGAT CACTTCGGCC
AAGGGTCTCA CCAACGGCGT GGTGCCGATG GGCGCGGTGT TCGTCAAGTC GCACGTGCAC
GACGCCTTCA TGCACGGCCC CGACGGCATC GAACTGTTCC ATGGCTATAC CTACTCGGGG
CATCCGCTGG CCTGCGCAGC GGGCCTCGCT TCGCTCGATA TTTTTGCGGA GTGCGACGTG
CTGGCGCATG CCCGTGGCAT TGCCGGCTAT TGGGAGGACG CGGTGCACGC GCTGAAGGGA
CTGCCGCACG TGAAGGACCT TCGCAATCTC GGCCTGATCG CGGCGATCGA GCTGGATTCG
ATCCCGGGCC GAATCGGCGC GCGTGCCTTC GATGCGTTCA GGCGCGCCTT TGCCGACGGC
CTGCTGATCC GCGTCACGGG CGACACGATC GCGCTGTCGC CGCCGCTGGT ACTCGAGAAG
ACGCACATCG ACGAAATGTT CGAAAAGATC GCCGCGATCC TGCGCGCGCT GGACTGA
 
Protein sequence
MQKSSGPALG SYWMPFTANR DFKQHPRMLV SAEGMYYKDI DGKPVLDATA GLWCVPLGHR 
QPKIVKAVQE AVSTLDYGPS FQVGHPAVFA FAERLIDYSG NRFGQVFFTN SGSESVDTAL
KIAIGYHRAC GDATRTRLIG RERGYHGVGF GGISVGGISA NRRGFGSLLT GVDHLPHTYN
LEHNAYTRGE PTWGSHLAED LERIVALHDA STIAAVIVEP VAGSTGVLVP PKGYLKRLRE
ICTAHGILLI FDEVITGFGR LTTPFAADYF DVEPDMITSA KGLTNGVVPM GAVFVKSHVH
DAFMHGPDGI ELFHGYTYSG HPLACAAGLA SLDIFAECDV LAHARGIAGY WEDAVHALKG
LPHVKDLRNL GLIAAIELDS IPGRIGARAF DAFRRAFADG LLIRVTGDTI ALSPPLVLEK
THIDEMFEKI AAILRALD