| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4247 |
|---|
| Symbol | |
|---|
| ID | 6278744 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | + |
|---|
| Start bp | 291726 |
|---|
| End bp | 292955 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642615343 |
|---|
| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
|---|
| Protein accession | YP_001887996 |
|---|
| Protein GI | 187918965 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1251] NAD(P)H-nitrite reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAATG CGATCAAGTC AACGAGCCGG CGGGTAGCTA TCGTCGGCGG CGGCCTCGCC
GCACTGCGCT GTACCGAAGA ACTAAGGCGG GGAGGGCATG ACGGCAGGAT CGCGATCGTG
ACGGCGGAAC CGCACTTGCC GTATGACCGG CCGCCGCTTT CGAAGGATGT GCTGCTTGGG
GCGAAGGAGT TCGACGAAGT CCAGTATAGG GACGACGCGT TTTATCGCGA CCACCAGGTG
GACATGTACC TGTCCCACCC GGCGACCGAG CTGCGCATCC TCGAACGTGA GGTGGTGGCG
AACGGGTCCG CGATTGCCTT CGACGACTTG CTTATCTGCA CGGGTGCCTC CCCACGTTCC
TTCCCCCTGA AGTCGAATTG CGACGGAATC TACACGCTGG GCCGCATCGA GGACACGCTC
AGGCTTCGCG CGGCACTCCG GAGCGGAGCG CCGCGGGTGG TAATCCTGGG CGCCGGCTTC
ATCGGCGCGG AAGTCGCGTC GTGCGCGCGC TCCCTTGGAC TGGAAACGAC CATCGTCAAC
CTGGCAGCCA CTCCGCTGGA GCGTGCCGTC GGACCGGAGA TGGGTGGAAT GTTGTCCGCG
CTGCACGCAG ACCATGGTGT GAGATTGCTC TGTAGTGTGT CCATCGCGGA GATCTTCGGC
GATGGGCGCG TCGAGGAATT GCTGCTCACT AACGGCGAGC GTATCGCGTG CGACATCCTG
GTCATCGGCA TTGGCTCGAC ACCGAATATC GGCTGGCTCG AAGGTTCGGG CCTTGAGCTC
GCGAATGGCA TCGTGTGCGA TGCAGCGCTA TCGGCGGGAC CTCCGGGCAT TTACGCGGCT
GGTGACGTGG CCTGGTGGCC GAACGGCCTG TTCGGACGCG GTATGCGTTG CGAGCAGTGG
ACCAATGCCG CTGAGCAAGG CCGCCACGTC GCGCGAAACA TTCTGGCGGG CCATGAAGGC
AGAACCCCCT TCGTCGGCAG CAACTACTTC TGGTCGGATC AATATGGCAA GCGCATCCAG
TTTGCTGGCT CGGAAGTCGC GGACGAGGTG AAGATCGTCA AGGGTTCGTA CGGGGAAGGA
CATTTCCTTG CCTACTACCG GAAGGGCGAC CAGTTGTGCG GCGCGCTGGC ACTGAACGAA
CCTAAAAGCC TGATGCTGGC CAAGCAGCAG ATCGAGAAGC GGAGCCGTTG GGACCTCGCA
CTCGAAGCCA TGGGCCATTG TGTTCCGTAG
|
|---|
| Protein sequence | MQNAIKSTSR RVAIVGGGLA ALRCTEELRR GGHDGRIAIV TAEPHLPYDR PPLSKDVLLG
AKEFDEVQYR DDAFYRDHQV DMYLSHPATE LRILEREVVA NGSAIAFDDL LICTGASPRS
FPLKSNCDGI YTLGRIEDTL RLRAALRSGA PRVVILGAGF IGAEVASCAR SLGLETTIVN
LAATPLERAV GPEMGGMLSA LHADHGVRLL CSVSIAEIFG DGRVEELLLT NGERIACDIL
VIGIGSTPNI GWLEGSGLEL ANGIVCDAAL SAGPPGIYAA GDVAWWPNGL FGRGMRCEQW
TNAAEQGRHV ARNILAGHEG RTPFVGSNYF WSDQYGKRIQ FAGSEVADEV KIVKGSYGEG
HFLAYYRKGD QLCGALALNE PKSLMLAKQQ IEKRSRWDLA LEAMGHCVP
|
|---|
| |