| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4229 |
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| Symbol | |
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| ID | 6278741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 271815 |
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| End bp | 273062 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642615327 |
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| Product | D-amino-acid dehydrogenase |
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| Protein accession | YP_001887980 |
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| Protein GI | 187918949 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.825619 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGATAT TGATCATCGG CGCGGGCGTC ATCGGCCTGT CGAGCGCGTA TTACCTGAGC
CGCGCGGGCT ATGACGTCAC GGTAGCGGAC CGGCATGCGG AGGTCGCCAG CGAAACCAGT
TTCGGCAACG GCGGGCAGCT GTCGTATAGC TACGTCGCGC CACTTGCCGG CCCCGGCGTC
GTGTCGAAAC TGCCGCGCTG GCTAACGCAG CGCGATTCGC CGGTACGTTT CCGGCCGAAG
CTGAGCGTCG AACAGTGGCG CTGGTGCTTC GAATTCCTGT CCGCCTGCAC ACGCGCCCGC
AGCGAGTTGA CCACGCAAAA GCTGCTGTCA CTGTCGTTCC TGAGCCGCAC GTTGATGCAC
GAACTCATCG CCGCCGAACC CTCGCTCGAT TTCGACTTCG TGCGCTCCGG CAAGCTCGTG
CTGCATCGCG ACGCCAACGC CATGCAAAGC GCGGTGGATT TGCTGGCGTT CCAGCGCACG
CTCGGTTGTG AACAGCAGGC GCTGAGCGCC GACGCATGCG TGGAAATCGA GCCGGCGCTT
GCGCATGCCC GGTCGTTTCT GGCGGGCGGC ATTCATACGC CGAGCGAAGA CACGGCCGAT
TGCCGGCGCT TCTGCAAGGG TCTGGAGGCG GTGCTGCGCG AGCGCGGCGT ACGCTTCTTG
ATGAACACGC CAATCGATGG CCTCAAGTTC GGTGCAAAAG GCGTCGAAGC CATTTGCGAT
GGCGCACCGC TCGCGGCGGA TCGGATTGTC GTCGCCTCGG GTGCGGGCGC AGCGCAATTG
CTCAAGCCGC TCGGCATCCG CGTGGCGATC TATCCGATCA AGGGCTATAG CCTGACATTC
GATCTTCAGC CGCACATCAC GGCGCCGCAT GTGAGCATCA CCGACTTCGC CCGTAAGGTC
GTCTATGCGC GGCTGGGCGA ACGGCTGCGA GTTGGGGGCA TTGCCGATAT CGGCGGCTAT
TCGCTCGATG CAGACCCCGC GCGCTTCGCG ACGCTGCGCA AGGAGACGGC TACGCTGTTT
CCCGAGGTCG CCCAATCCGC CGCTTCTGGC GAATGGACCG GTTTGCGTCC GGCAACGCCG
CACGGCCTGC CGATTGTCGG ACCGACGCGC TATCCGAACC TGTGGCTCAA CGTAGGACAT
GGCGCGCTCG GCTTTACGCT CGCGACGGGT TCAGCCGCGC TATTGGCGGA TGGACTCGCG
GGCAGCAACA ATCGCGAACT GAGCAGCGCC TTCGTCCTTT CGCATTGA
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| Protein sequence | MRILIIGAGV IGLSSAYYLS RAGYDVTVAD RHAEVASETS FGNGGQLSYS YVAPLAGPGV
VSKLPRWLTQ RDSPVRFRPK LSVEQWRWCF EFLSACTRAR SELTTQKLLS LSFLSRTLMH
ELIAAEPSLD FDFVRSGKLV LHRDANAMQS AVDLLAFQRT LGCEQQALSA DACVEIEPAL
AHARSFLAGG IHTPSEDTAD CRRFCKGLEA VLRERGVRFL MNTPIDGLKF GAKGVEAICD
GAPLAADRIV VASGAGAAQL LKPLGIRVAI YPIKGYSLTF DLQPHITAPH VSITDFARKV
VYARLGERLR VGGIADIGGY SLDADPARFA TLRKETATLF PEVAQSAASG EWTGLRPATP
HGLPIVGPTR YPNLWLNVGH GALGFTLATG SAALLADGLA GSNNRELSSA FVLSH
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