| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4227 |
|---|
| Symbol | |
|---|
| ID | 6278391 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 269803 |
|---|
| End bp | 270717 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642615325 |
|---|
| Product | ornithine cyclodeaminase/mu-crystallin |
|---|
| Protein accession | YP_001887978 |
|---|
| Protein GI | 187918947 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAATTCA TCACCGACGA CCACGTGCGC CGCCTCATCA CGATGCGCGA CGCAATTGCC
GAACTGCGCA TCGCGCTCGC GGAACACGGC GCGGGCCGCG CTCCGGTTCA ACCGCGCGTC
AGAACGAAGG GCGAGCATGT ATCCGTCAGC ATGATGGGCG CGATCCTGCC GTCGCGCGGC
GTGTGCGGCG CCAAGGTCTA TTCGACGCAT GGCGGCCGGT TCGATTTTGT CGTTCCGCTC
TTTTCGAGCG ACGACGGATG CCTGATATCG ATTCTTCACG GCGACGCACT GACCGAATTC
CGCACCGCCG CGGTCACGCG TATCGCCAGC GACGCACTCG CCCGACCCGG CGCACGGGTG
CTCGCCGTGT TCGGTACCGG CCGGCAAGCG AGAGCACATA TCCGTGCGCT CGCTGACGGG
TCCAGCATCG AGCGGGTGCT GATCGTCGGC ATCGACCATG TGGCGCAAAC GGTTGCTGAA
ATGCAGGCGC TGTTCCCGGA CAAACTGATC GAAGCCAGCC ACGCGCAAGC GGCCGCTCGC
GCCGCCGATG TGATCGTCAC CGCCACGCGT AGCGCGACGC CGCTCTTCGA CGGCACGTGG
GTGAAGCCGG GCGTATTCAT CGCGGCGATC GGTTCAAGCA AACCCGATGC GCGCGAACTC
GACGACGCGC TGCTGGCGCG CGCGAATACA CTCGTCGTCG AGTCGCTCGA ACAGGCCCGC
AGCGAAGCGG GCGATCTGCT GATGGCCGCA CCGGGTGTGG TCGCCTGGGA CGACATCATC
GAACTGGGTG CGGTGCTCGC GAACCGCCGG ATCGAGCCTC GCGCCCGAGG CGACGTGACG
ATTTTCAAGT CGCTCGGCTT CGGCCTCGCT GACGTTGCGT TAGCCGGTTT GATCACGCGG
CGGATGAGCA ACTGA
|
|---|
| Protein sequence | MQFITDDHVR RLITMRDAIA ELRIALAEHG AGRAPVQPRV RTKGEHVSVS MMGAILPSRG
VCGAKVYSTH GGRFDFVVPL FSSDDGCLIS ILHGDALTEF RTAAVTRIAS DALARPGARV
LAVFGTGRQA RAHIRALADG SSIERVLIVG IDHVAQTVAE MQALFPDKLI EASHAQAAAR
AADVIVTATR SATPLFDGTW VKPGVFIAAI GSSKPDAREL DDALLARANT LVVESLEQAR
SEAGDLLMAA PGVVAWDDII ELGAVLANRR IEPRARGDVT IFKSLGFGLA DVALAGLITR
RMSN
|
|---|
| |