| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4196 |
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| Symbol | |
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| ID | 6279111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 242720 |
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| End bp | 243685 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642615295 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_001887948 |
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| Protein GI | 187918917 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0260409 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACA AATCCCTCAT CAAGGTAGCG GTCCTCGACG ACTATCAGAA CGTCGCGCTG
AGCATGGCTG ACTGGTCGCC ACTCACGAAC CGTGCTGAAG TGACAGTGTT CAACGATCAC
GTCGCCGATA TCGGGAACCT CATCCAGCGC CTGCAGCCAT TCGACGTCAT CTGCGCGATG
CGGGAACGCA CACCGTTGCC CCGCGAGGTC ATCGAAAGCC TGCCGAATCT GAAGCTGATT
GCCTCGACCG GCGCAGGGAA TACGTCGATC GATCAGGATG CGGCGGCCGA ACGCGGCATC
GAAATTCGTC ACACCGGCTA TTCGTCCACG CCGACGATCG AGATGACGTG GGCGCTGATT
CTCGCGATGG CCCGCAATAT TCCGCTCGAG AATCAGTCGG TGCGGCAAGG AGGCTGGCAA
CTTTCGCTTG GCGATGAACT CGCGGGCAAG ACGCTCGGAT TGCTCGGCCT TGGCCGCGTC
GGTTCGGCTG TCGGCATCAT CGGGCGGGCA TTCAGAATGA ACGTTGTCGC GTGGAGCCAG
AACCTTACCG AGGAACGCGC CGCCGAAAAA GGCGTGCAGC GAGTCAGCAA GGACGAGTTG
TTCTCAACAG CGGATTTCCT GTCGATCCAC GTGCGGCTTG GCGAGCGAAC CACCGGGTTG
GTCGGTGCAG CGGAATTCGC ACAGATGAAA CCCACGAGCC GGCTGATCAA TACGTCGAGA
GGTCCGATCG TCGACTCCGC CGCGCTGCTT ACCGCGCTCA CAACCGGCCA GATTACCGGC
GCCGCGCTGG ATGTGTACGA CGTCGAACCG CTCGACAACC CGCACCCTCT GCGCGAATTG
CCCAACGTGC TCGCAACGCC TCATATCGGC TACGTATCGA AGGAGTTGTA TCGCACCTTC
TACGGCGATA CGGTGCGCAA CATCGTTCAA TGGCTCGATG AAAGCGGCGG TTCCGCGCGC
GGCTAG
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| Protein sequence | MNDKSLIKVA VLDDYQNVAL SMADWSPLTN RAEVTVFNDH VADIGNLIQR LQPFDVICAM
RERTPLPREV IESLPNLKLI ASTGAGNTSI DQDAAAERGI EIRHTGYSST PTIEMTWALI
LAMARNIPLE NQSVRQGGWQ LSLGDELAGK TLGLLGLGRV GSAVGIIGRA FRMNVVAWSQ
NLTEERAAEK GVQRVSKDEL FSTADFLSIH VRLGERTTGL VGAAEFAQMK PTSRLINTSR
GPIVDSAALL TALTTGQITG AALDVYDVEP LDNPHPLREL PNVLATPHIG YVSKELYRTF
YGDTVRNIVQ WLDESGGSAR G
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