Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4192 |
Symbol | |
ID | 6279221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 239273 |
End bp | 239929 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642615291 |
Product | Peroxidase |
Protein accession | YP_001887944 |
Protein GI | 187918913 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0450] Peroxiredoxin |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.0504041 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTATTC GATTAGGAGA AGACGCTCCC GATTTCACCG CGGAAACCAC CGAAGGGACG ATCCATTTTC ACGAATGGAT CGGCGACCAT TGGGCAGTCC TGTTTTCGCA TCCGAAGGAC TTCACTCCCG TTTGCACCAC GGAACTCGGA TACCTGGCGG GCCTCAAGCC GGAATTCGAC AAGCGCAACA CGAAAATTAT CGGGCTCAGC GTCGATCCGG TCAGCGACCA CACGGAGTGG GTCAAAGATA TCGCCGAGAC TCAGGGTCAC GCAATCAATT ACCCGCTAAT CGGCGACTCG GACCTGAAGG TCGCGAAGCT CTATGACATG ATCCACCCCG AAGCTAGCGG CGGCGGGCCG CGCACTGCGG TCGACAACGC AACGGTGCGC TCGGTGTTTC TCATCGGCCC GGACAAGAAG GTCAAAGCCA TGCTTGTCTA TCCGATGAGC GCGGGCCGCA ATTTCGACGA AGTACTGCGC CTGCTCGATG CGCTGCAACT CAACGCGAAA CACACGGTGG CGACACCGGT AAACTGGAAA CCGGGTGAAG ACGTCATCAT TCCGACATCC GTTTCCAACG ATGCCGCAAC GCAAAAATAT CCGCAGGGTT TCAAAACCGT AAAGCCTTAT CTGCGGTACG TTGCGCAACC GAAGTAA
|
Protein sequence | MSIRLGEDAP DFTAETTEGT IHFHEWIGDH WAVLFSHPKD FTPVCTTELG YLAGLKPEFD KRNTKIIGLS VDPVSDHTEW VKDIAETQGH AINYPLIGDS DLKVAKLYDM IHPEASGGGP RTAVDNATVR SVFLIGPDKK VKAMLVYPMS AGRNFDEVLR LLDALQLNAK HTVATPVNWK PGEDVIIPTS VSNDAATQKY PQGFKTVKPY LRYVAQPK
|
| |