Gene Bphyt_4192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4192 
Symbol 
ID6279221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp239273 
End bp239929 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content56% 
IMG OID642615291 
ProductPeroxidase 
Protein accessionYP_001887944 
Protein GI187918913 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0450] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.0504041 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTATTC GATTAGGAGA AGACGCTCCC GATTTCACCG CGGAAACCAC CGAAGGGACG 
ATCCATTTTC ACGAATGGAT CGGCGACCAT TGGGCAGTCC TGTTTTCGCA TCCGAAGGAC
TTCACTCCCG TTTGCACCAC GGAACTCGGA TACCTGGCGG GCCTCAAGCC GGAATTCGAC
AAGCGCAACA CGAAAATTAT CGGGCTCAGC GTCGATCCGG TCAGCGACCA CACGGAGTGG
GTCAAAGATA TCGCCGAGAC TCAGGGTCAC GCAATCAATT ACCCGCTAAT CGGCGACTCG
GACCTGAAGG TCGCGAAGCT CTATGACATG ATCCACCCCG AAGCTAGCGG CGGCGGGCCG
CGCACTGCGG TCGACAACGC AACGGTGCGC TCGGTGTTTC TCATCGGCCC GGACAAGAAG
GTCAAAGCCA TGCTTGTCTA TCCGATGAGC GCGGGCCGCA ATTTCGACGA AGTACTGCGC
CTGCTCGATG CGCTGCAACT CAACGCGAAA CACACGGTGG CGACACCGGT AAACTGGAAA
CCGGGTGAAG ACGTCATCAT TCCGACATCC GTTTCCAACG ATGCCGCAAC GCAAAAATAT
CCGCAGGGTT TCAAAACCGT AAAGCCTTAT CTGCGGTACG TTGCGCAACC GAAGTAA
 
Protein sequence
MSIRLGEDAP DFTAETTEGT IHFHEWIGDH WAVLFSHPKD FTPVCTTELG YLAGLKPEFD 
KRNTKIIGLS VDPVSDHTEW VKDIAETQGH AINYPLIGDS DLKVAKLYDM IHPEASGGGP
RTAVDNATVR SVFLIGPDKK VKAMLVYPMS AGRNFDEVLR LLDALQLNAK HTVATPVNWK
PGEDVIIPTS VSNDAATQKY PQGFKTVKPY LRYVAQPK