Gene Bphyt_4190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4190 
Symbol 
ID6279056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp236940 
End bp237956 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content63% 
IMG OID642615289 
ProductPyridoxal 4-dehydrogenase 
Protein accessionYP_001887942 
Protein GI187918911 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0161773 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCCGG TGGCAAAGCG TAAATGGCCG CGTTCGGGAC TCGAAACGAC GCTGATGGGT 
TTCGGCGCTG CACCGATCGG CAATATCTTC AGGCCGATCA GCGAAGAGGA TTCGGCGGCG
CTTATCAAAG CCGCGTGGGA CGCGGGGGTG CGTTACTTCG ACACCGCGCC CATGTACGGC
CACGGTTTGA GCGAAGCGCG CTGCGGGCAG GCTCTGCGCT GGTATCCGCG CGACCAGTTC
GTGCTGTCGA CCAAAGTGGG GCGTTTGCTC AAGCCGCGCA AGCGCGCTGA AATCAACTTC
ACACCGTGGG TCGACGGGCT GCCGTTCGAC ATGCGTTTCG ACTACAGCTA CGACGGCGTG
ATGCGTTCGA TCGAGGACAG CCTGCAGCGC ATGGCGCTGG AGCATATCGA TATCGCCTTG
ATTCACGACA TCGACCTGTT CACGCATGGC GATGGCCAGC CGCAGGTGTT CGAGGCCGCC
ATGAACGGCG CGGCTAAGGC GCTGCTCAAG CTGCGCGACG AGGGTGTCGT CAAGGCCGTG
GGTGTGGGCG TGAACGAGTG GCAGGTCGCG CATGAAGCGA TCCGGCGCAG CGACTTTGAC
TGCCTGTTGC TGGCCGGCCG CTACACATTG CTGGAGCAGG ACGCGCTCGA CGGCTTCCTG
CCGCTGTGCG AGGAGCGTCA GGTGTCGGTG GTTCTCGGCG GCGGTTACAA CAGCGGCATT
CTCGCCACGG GCGCCGTGCC CGGCGCAAAA TACAACTATG CGCCCGCGCC GGAAGCAATT
CTGGAACGTG TGCGCAAGAT CGAGCAGGTG TGCCGCGACT TCTCGGTGCC GCTCAAAGCC
GCCTCCCTGC AATTCGTGCT CGGTCACCCG GCTATTCCGA CGAATATCCC TGGCGTGCGC
AGCGTCGCGC AACTTGAAGA CAACCTGCAA ACTTTCCGGG CCGACATTCC GGCGGAATTC
TGGGCCGAAT TGAAGCGCCG CGGACTGATT CGCGAGGACT CGCCGACGCC TCGCTAG
 
Protein sequence
MDPVAKRKWP RSGLETTLMG FGAAPIGNIF RPISEEDSAA LIKAAWDAGV RYFDTAPMYG 
HGLSEARCGQ ALRWYPRDQF VLSTKVGRLL KPRKRAEINF TPWVDGLPFD MRFDYSYDGV
MRSIEDSLQR MALEHIDIAL IHDIDLFTHG DGQPQVFEAA MNGAAKALLK LRDEGVVKAV
GVGVNEWQVA HEAIRRSDFD CLLLAGRYTL LEQDALDGFL PLCEERQVSV VLGGGYNSGI
LATGAVPGAK YNYAPAPEAI LERVRKIEQV CRDFSVPLKA ASLQFVLGHP AIPTNIPGVR
SVAQLEDNLQ TFRADIPAEF WAELKRRGLI REDSPTPR