| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4181 |
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| Symbol | |
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| ID | 6278070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 226144 |
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| End bp | 226827 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642615280 |
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| Product | transcriptional regulator, TetR family |
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| Protein accession | YP_001887933 |
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| Protein GI | 187918902 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.000221958 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTCTCG CGAGCACGCC CCCCGGCCGG GCATTGAAAA CGGCCAAAGC CGGCGCCACG
CAACCGCCCC GTCAACGCGA CCCCGAGGTC ACCCGGGCCC GCATTCTCGA AGCCGCCAAG
AAAGAGTTCG CCAAACTCGG CCTCGCCGGC GCACGCGTCG AAGCCATCGC GACGCGCGCC
AAGGCTAACA AGCGGATGAT CTATCACTAC TTCGGCAGCA AGGAGGAGTT GTTCCAGGCC
GTGCTCGAAG ATGCCTACGC CGACATCCGC TCCGCCGAAC TGAAGCTGAA CCTCGACCAC
CTGTCTCCCG AAGACGCGAT CGTCGCGCTC ACCACGCACA CGTGGAACTA CTACCTGAAG
AACCCCGAGT TCATGACGCT CGTGAACAGC GAGAACCTTC ACAAGGCGCG CCATGTGAAA
AAGTCCGAAC GGTTCAAGGA ACTGCATCAT GGCTTCATCT CGATGTTGCA ACGCATAATC
GATCGCGGCG TCGAAGCGGG CGTGTTTCGC GCGGGCGTCG ATGCACGGCA ACTGCATATC
ACCATGGCGG CGGTCGGCTA CTATTACCTG ACCAATCGCT TCACGAGCGG TGTGATCTTC
GACATCGACT TCATGAGCAA AGAGGCTTTG AAGAACCGCC TCGACTTCAA TATCGAAACC
GTTCTGCGCC TGCTGCGCCC CTGA
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| Protein sequence | MTLASTPPGR ALKTAKAGAT QPPRQRDPEV TRARILEAAK KEFAKLGLAG ARVEAIATRA
KANKRMIYHY FGSKEELFQA VLEDAYADIR SAELKLNLDH LSPEDAIVAL TTHTWNYYLK
NPEFMTLVNS ENLHKARHVK KSERFKELHH GFISMLQRII DRGVEAGVFR AGVDARQLHI
TMAAVGYYYL TNRFTSGVIF DIDFMSKEAL KNRLDFNIET VLRLLRP
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