| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4150 |
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| Symbol | |
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| ID | 6279959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 192960 |
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| End bp | 194378 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642615250 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_001887903 |
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| Protein GI | 187918872 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATTCC CTCGATGCCG CTTATTGGCC GCTGTTTGCG CCTGCTGGTT CGCGGGCTGC
ACGGTCGGCC CCGACTATCA CCGGCCTGCT GTCGACACAC CGTCGTCGTT CCGCTATGCG
TCACCGGACG CCGAAGTGGT CGATCAGGGC GCCGTGCAAT GGTGGAGCCA GTTCAACGAT
CCAGTGCTCG ATGGCCTGAT CCAACGGGCG CTCGATCAGA ACAAGGACCT CGCCATCGCG
GCCGCGCGCG TCGACGAATT CTACGGACGC CTGATGACCA CGCGTGCCGG GCTCTTCCCA
CAAGTCGGTG CGAACTTCGG CGGCGGGCGC GGCCGCAGCG TGCCCGCGCC GGGCTTCGCG
CCGGCGGTCG GCAATCAGGT GCAACTGGAC GTGATGGCGT CGTGGGAAAT CGATCTGTTC
GGCCGCCTGC GGCGCCTGAC CGAAGCCGCG CGCGCCGATT ATCTCGGCAC TCAGGCCGCG
CAGCAGGCGA CCCGTATCGC GTTGATCTCC AGTGTGGCGA CCTCGTATCT GTTGCTGCGC
GATCTCGACC AGCGGCTGGA AATCGCGAAG TCGACGCTCG CCAGCCGTGC TGATGCGCTC
TCGCTGTTTC AGGAGCGCTT CACCGGCGGA GTCGTGTCGC AACTTCAGGT GAGTCAGGCG
AAGTCCGAAT ACGAGTCGGC GCAAGCATCC GTGTACGCAT TCCAGCAGCA GATCGCGCAA
CAGGAAAACG CGTTGTCGCT GCTGCTCGGC GACAACCCCG GACCGATCCC GCGCGGCAAG
CCGTTGACGC AACTCAGCGC GCCCGCGATC CCGGCGGGCC TGCCGTCGTC GCTGCTTGAA
CGACGGCCCG ATATCTTGCA AGCCGAACAG GCTTTGGTCT CCGCGAACGC GTCGATTGGC
GCGGCGCGCG CGCAGTACTT CCCGAGCATT TCGCTGACGG GCATGTTCGG CGCGGCGAGC
ACGGCGCTCT CCGGACTGTG GACGGGGCCG GCGCGCATCT GGTCGTTTGC GGGCGCGATC
TCGCAGCCGA TCTTCACCGG CGGCGCGATC ACAGGATCGG TGCGCACCGC CGAGGCGCAG
CAGCAAGAGG CGCTGTTCAG CTACGAGCAG GCTATCCAGT CCGCTTTTGC CGATGTGGAG
AACGCCTTGG TCGGCGTGGC GCGCGTGCGT GACCAGTTGC AGGCGACCAA TCGCCAGGTC
GAGGCGCTTG CGCAATATGC TTCGCTCGCG CGCGATTTAT ACGAAGGCGG CTATACGAGC
TACCTGGAAG TGCTCGACGC CGAGCGCAGT CTGTTCAATG CGCAGCTTCA GCAGTCGCAA
TTGCAGGACC AGCAGCTTGC CGAGATCGTC GCGTTGTACA AGGCGCTTGG CTATGGCTGG
AACGTCGACA GCGGCTCGCA GACGCCAACG CGCGGGTGA
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| Protein sequence | MRFPRCRLLA AVCACWFAGC TVGPDYHRPA VDTPSSFRYA SPDAEVVDQG AVQWWSQFND
PVLDGLIQRA LDQNKDLAIA AARVDEFYGR LMTTRAGLFP QVGANFGGGR GRSVPAPGFA
PAVGNQVQLD VMASWEIDLF GRLRRLTEAA RADYLGTQAA QQATRIALIS SVATSYLLLR
DLDQRLEIAK STLASRADAL SLFQERFTGG VVSQLQVSQA KSEYESAQAS VYAFQQQIAQ
QENALSLLLG DNPGPIPRGK PLTQLSAPAI PAGLPSSLLE RRPDILQAEQ ALVSANASIG
AARAQYFPSI SLTGMFGAAS TALSGLWTGP ARIWSFAGAI SQPIFTGGAI TGSVRTAEAQ
QQEALFSYEQ AIQSAFADVE NALVGVARVR DQLQATNRQV EALAQYASLA RDLYEGGYTS
YLEVLDAERS LFNAQLQQSQ LQDQQLAEIV ALYKALGYGW NVDSGSQTPT RG
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