Gene Bphyt_4134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4134 
Symbol 
ID6279112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp176204 
End bp177379 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content67% 
IMG OID642615235 
Productglycosyl transferase family 9 
Protein accessionYP_001887888 
Protein GI187918857 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0859] ADP-heptose:LPS heptosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCTGGA AAAGTCTGCT GATCGAAACA CCGGTCTGGT TGATGGGCCG CTTCTACCCG 
CCACGGTTTG ATCCGAGTCG CGACACGCCG CGCGAGATTC TCGTGCTGCG TCCGAACGAT
TTCGGCGAAC TGCTCACCAC CACACCGCTC TTCGAGGCGC TGCGTAAGCG CTTTCCCACG
ACGCGCCTGA TCGCCGGCGT AGGCAGTTGG GGGCGTCCGA TACTCGAGAA CAATCCCTTC
GTCGACGAGA TCGTGGAAAT CGACGCGCCC TGGAACAACA AGCTCGTCGA GGACCGTTCG
CACGGCAACG TGCTGCGTTT TCTATGGAAG TCTCCACAGG TCATCGCACT GCGCGCGCGC
GGCGGCTTCG ATGTGGGTAT CGACGTGCTC GGCAGTTACA TGGGCGCGCT GCTGATGATG
CGCACGGGCG TGCGGTATCG CATCGGCGTG CGCGGCTATC GCGGCGGCTG GAGCGGCTGT
CAGGCGTTTA TCGAATTCGC TGCCCGGCAA TGCGGCCGCG CCGCGCTTGC GCAGGGCGAA
CTGATCGGCG CGACGGCGCT GCCGGAAGCG CGCCCGCAAC TGTTCCTGAC CGACGACGAG
CGTGCCACCG CATCGCAAAT CTGGAGTGCG GGCAACGTGC CGGGGCGTCG TACCGTGCGG
TTGATCGTCG GCGTCGGGGC CGGCGTGGCG ACCAAGGCAT GGGACGCGCG TCAGGTGGGC
GCCGCGCTCG CGCGGATCGC GCAGACGTTG GAACAAGCCG GCGACGCGTG CGATATCGTG
ATCGTCGGCA GCAAAGCGGA TCAGGCGCGC GCCGTCGAGG CGATCGCCGC GGCGGGTTCG
GGCGTGCCGG TCCGCTCGCT GGCAGGCGAG GTGCCGATGC GCGTGATGTT CGCTCTCGCT
GAAGAGGCCA ACGTCGTGCT GACGAACTCG ACGATGTTGA TGCACGTCGC GGCCGCGTTT
CGCCGTCCGA CCGTTGCCGT GATCGGCGGA AGCATCACCC GACCCGACAG GCACGATGCC
ATCTGGGGTT ATCCGCCGCC GTATCGCAGT GTGTCGCCTG AGCAATATGT CGCGGGCGAA
CCTGCGCGGA ACTGGCCGAG CGTCGAGCGG GTCGTGCAAG CGGTGCTGGA GGCGGTCGCC
ACCCAGCAGC GGGCGCAAGT CGACGCGGCA GCCTGA
 
Protein sequence
MGWKSLLIET PVWLMGRFYP PRFDPSRDTP REILVLRPND FGELLTTTPL FEALRKRFPT 
TRLIAGVGSW GRPILENNPF VDEIVEIDAP WNNKLVEDRS HGNVLRFLWK SPQVIALRAR
GGFDVGIDVL GSYMGALLMM RTGVRYRIGV RGYRGGWSGC QAFIEFAARQ CGRAALAQGE
LIGATALPEA RPQLFLTDDE RATASQIWSA GNVPGRRTVR LIVGVGAGVA TKAWDARQVG
AALARIAQTL EQAGDACDIV IVGSKADQAR AVEAIAAAGS GVPVRSLAGE VPMRVMFALA
EEANVVLTNS TMLMHVAAAF RRPTVAVIGG SITRPDRHDA IWGYPPPYRS VSPEQYVAGE
PARNWPSVER VVQAVLEAVA TQQRAQVDAA A