Gene Bphyt_4131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4131 
Symbol 
ID6278945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp173034 
End bp174371 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content63% 
IMG OID642615232 
Productserine/threonine protein kinase 
Protein accessionYP_001887885 
Protein GI187918854 
COG category[S] Function unknown 
COG ID[COG4886] Leucine-rich repeat (LRR) protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAACGA CACTTGATCA TTTGCGGGCC GGCCAGCTCG CGGGCACGCG CCGGCTGAAA 
CTGGCTTGCG GCCTGACTGA ATTTCCGCGC GAGATTTTCG ACCTCGCCGA CACGCTGGAA
GTTCTCGACC TGTCGGGCAA CGCGCTCACG TCGCTGCCCG ACGATCTGCC ACGTCTGCGC
AAGCTGCGCA TTCTCTTCGG CTCCGACAAC CCGTTCACCG AGTTGCCCGA GGTGCTGGGA
CAGTGTTCGC AATTGAGCAT GGTCGGCTTC AAGGCCAACC GCATCCGGCA TGTATCCGGC
AAAGCGCTGC CCCCGCAATT GCGCTGGTTG ATCCTCACTG ACAACGAGAT CGAAGTGTTG
CCGGCCGAAA TCGGCCGCTG TTCCCAATTG CAAAAGCTGA TGCTGGCGGG CAATCGTCTG
CGAACGCTGC CCGAAGAATT GGCCGCCTGC TCGCAGCTCG AACTGCTGCG GCTCGCCGCG
AATCAGCTCG ATGGACTGCC TGACTGGTTG CTGCGTCTGC CGCGGCTGTC CTGGCTGGCG
TACGCCGGCA ATCCGTTCAG CGAGGCGCTC GAAGCGGCGG CGCTCACCGA CACGCCGAGC
GTCGCGATAG CGTGGCACGA CTTGAAACTC GACGCGCCGT TAGGCGAGGG CGCCTCCGGT
GTCATCTATC GCGCGGAGTT GGCGGGTCGG CACGGCGCGT CCCGCTCTGT CGCGGTGAAA
CTGTTCAAGG GGGCGGTGAC CAGCGACGGT TTGCCCGACT GCGAAATGGC AGCCTGCATT
CGCGCGGGCG ATCATACGAA CCTGATCCCG GTGGCGGGGA AAGTGAAGGA TCATCCCGCC
GGTACGCACG GCCTCGTGAT GGAACTGATC GATCCGCAAT TCACCAACCT TGCCGGTCCG
CCGAGTCTCG AATCCTGCAC GCGCGATATC TATGACGCCG ACACACGCTT CGATATGGCT
TCGGCGTTGG GCATTGCGTA CGGTATCGCG TCGGCGGCGT GTCATTTGCA CGAGCAAGGC
ATCATGCACG GCGATCTGTA CGCGCACAAT ATCCTGTACG GCGGAGAGGG GCGCGCGTTG
TTGGGCGATT TCGGCGCGGC TTCGTTCTAT GCTTTGGGCG ATCGGCGCAT CGGCCTCGCG
CTTCAGCGCC TCGAAGTCAG CGCCTACGGT TGTCTGCTCG AAGAGTTGCT CGAACGATGC
GATTGGCCGG AGGCGTCGGC GAACATTCGC GCTCTCCTCG TGGAGTTGAA GGACAATTGC
TTGAGCGAGG CGATCGACAG CCGGCCGTTG TTCGATGAGA TCACCGCGCG TTTGCTGGCG
CTGATGGGCG ATCGATGA
 
Protein sequence
MTTTLDHLRA GQLAGTRRLK LACGLTEFPR EIFDLADTLE VLDLSGNALT SLPDDLPRLR 
KLRILFGSDN PFTELPEVLG QCSQLSMVGF KANRIRHVSG KALPPQLRWL ILTDNEIEVL
PAEIGRCSQL QKLMLAGNRL RTLPEELAAC SQLELLRLAA NQLDGLPDWL LRLPRLSWLA
YAGNPFSEAL EAAALTDTPS VAIAWHDLKL DAPLGEGASG VIYRAELAGR HGASRSVAVK
LFKGAVTSDG LPDCEMAACI RAGDHTNLIP VAGKVKDHPA GTHGLVMELI DPQFTNLAGP
PSLESCTRDI YDADTRFDMA SALGIAYGIA SAACHLHEQG IMHGDLYAHN ILYGGEGRAL
LGDFGAASFY ALGDRRIGLA LQRLEVSAYG CLLEELLERC DWPEASANIR ALLVELKDNC
LSEAIDSRPL FDEITARLLA LMGDR