| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4104 |
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| Symbol | |
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| ID | 6278803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 144136 |
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| End bp | 145692 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642615205 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_001887858 |
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| Protein GI | 187918827 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACCCGA CCGCCACCGC CCTGCCGTTC CGCAACGCCC TGTTCGCCAT GCTCGGCATC
GGCCTCGTCA ACATGCTGGT CGCACTCGAT CAGACGGTTG TCAGCACCGC GCTGCCTTCC
ATCGTCGCCG AGTTGCATGG GTTCGAGTAC TACGCGTGGA TCGCCAGCGC GTATCTGCTG
GCGTCGGTGG TCACGGTGCC GGTGTTCGGG CGGCTCGGCG ACTACTTCGG CCGCAAGCGC
TTCGTGATCG CCGCGGTCAT CACGTTCACG GTGGCGTCCG TGCTCTGCGG CGTCGCGAAC
GACATGCTGT TTCTCGTCAT CGCGCGCGGC TTGCAAGGCG TCGGCGGCGG GATGATGGTG
GGCACCGCGT TCGCCTCGAT TCCCGATCTG TTTCCCGATC CGCGCGCGCG CGTGCGCTGG
CAAGTGGTGA TGGCCGCCGC ATACGGCATC GGCACGGCGG CGGGACCGTC GCTCGGCGGC
TGGATGAGCG AGCACTGGGG CTGGCGTTCG ACCTTCCTGA TCAATCTGCC GGTCGGCGCG
GCGGCGCTGT ATTTCATCTG GGCGCATCTG CCGGCCTTCC GGCGTCCGCA TGAAGGCGAC
GTCAAAATCG ACTGGCTCGG TGCGGCGCTG GTCGCGGCCG TGCTCGGCGG CCTGCAGGCT
TTTATCGAAG CCGTGCCAAA AAACGGCCTG ACCGCCGGCA ATCTCACGCT GGCCGCTTGC
GTGATCGTGG GCACGATCGC ACTGTTGATC TGCGAGAAGC GCGCGACCCA CCCGATCATT
CCGCTCGATC TGTTCAGGGA CCCGCAACTC GTCACGCTGT TCACGCTCGG CATGCTGTCC
GGCTTCGTGA TGTTCTCGCT GATCTTCTTC GCGCCGTTGC TGCTGCAAGG CGGATTCGGG
TTGTCGCCGC AACAGGCCGG CCTGCTCGCC ACGCCCATCG CCGCCTGTAT CGCGCTCGGC
AGTCTGCTGA ATACGCGCAT CGTGATTCAC ATGAAGAAGC CGACGCAAAT TTTGTCGATC
GGCTTCGCGC TTCTGCTGTT CGCTGCCATC GCGCTGGCGT TCGCGAATCC GGACACGCCG
CACGTCTGGA TCGAATTGCC GATGGCTGCG GTCGGCATCG GTCTCGGCTT CATCCTCAAC
AATCTGAATG TGTTTGGCCA GGAGATTGCG GGGCGCGAGC GTTTCGGCAT CACCACGGCG
CTGCTGCAAT CCACGCGCAT GGTGGGCGGC ATGCTGGGCA CGAGCATTGT CGCGACCGTG
GTGCAGCATC ATTACCGCGA CGTGGTCGCG CGCACGATGA GCGTGCTCGG TGAGCCTGCT
GCGTCGCAAT GGCGGCCTCG CTTCGTCGAT CTGCGCATTC TGATCGATGA AGCGTCGCGT
CTGAAGCTGA TCGCGGACAT GAAGCCGTCA GGGCTCGATA CGCTCGCGTT GATCGACACG
GCGCGCGATG CGCTGGTGCA GTCGATACAT ATCGGCGTGT GGCTGACTGC AGTCGCGGCG
CTGGCGGCCG CGTTGCTGGT GCAGCGGATT TCGCACGTGG TGTTTCGCAA GAGCTGA
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| Protein sequence | MNPTATALPF RNALFAMLGI GLVNMLVALD QTVVSTALPS IVAELHGFEY YAWIASAYLL
ASVVTVPVFG RLGDYFGRKR FVIAAVITFT VASVLCGVAN DMLFLVIARG LQGVGGGMMV
GTAFASIPDL FPDPRARVRW QVVMAAAYGI GTAAGPSLGG WMSEHWGWRS TFLINLPVGA
AALYFIWAHL PAFRRPHEGD VKIDWLGAAL VAAVLGGLQA FIEAVPKNGL TAGNLTLAAC
VIVGTIALLI CEKRATHPII PLDLFRDPQL VTLFTLGMLS GFVMFSLIFF APLLLQGGFG
LSPQQAGLLA TPIAACIALG SLLNTRIVIH MKKPTQILSI GFALLLFAAI ALAFANPDTP
HVWIELPMAA VGIGLGFILN NLNVFGQEIA GRERFGITTA LLQSTRMVGG MLGTSIVATV
VQHHYRDVVA RTMSVLGEPA ASQWRPRFVD LRILIDEASR LKLIADMKPS GLDTLALIDT
ARDALVQSIH IGVWLTAVAA LAAALLVQRI SHVVFRKS
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