Gene Bphyt_4100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4100 
Symbol 
ID6278135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp139047 
End bp139757 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content65% 
IMG OID642615201 
ProductGntR domain protein 
Protein accessionYP_001887854 
Protein GI187918823 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGCC TAACTGAGAA GGTGGTGGCC ACCCTTTCCG ATGAAATCCG CCGCGGCACC 
CTGAGGCCGG GCGACCGCAT TCCCACCGAA GTCGCCATGA TGAAGCAACT CTCGGTGAGC
CGCTCCGTGG TGCGCGAGGC GATTTCGCGC CTGCAGGCGG CCAAGGTGGT CGAGACGCGT
CACGGCATCG GCACCTTCGT GCTGGAGCCG GCCACTGAAA AGTCCATGCA GTTGCCCGCC
GCCGATCTCT CCAGCATGCT GGACGTGATG GCGATCATCG AATTCCGGAT CGACGTCGAG
GCCGCGTCTG CCGCGCTCGC CGCGGCGCGG CGCACCGATC AGAACCTCAA GCAGATCCGC
GGCGCGCTGG AGCGTTTCGA GTCCGAACTC GAGCGCGGCA GCACCGACAC GCTCGCGCAC
GACATCGAGT TTCATTTGCA GATCGCGCGC GCGAGCGGCA ATCGCTATTT CTTCGACGTG
CTCAGCCAGC TTGGCCGCGC GGTCAGTCCT CGCACGCGGC TCGGCTCCGC GGAGATCGCG
GAACTCGACC ATATCGAGCA TTTGCGCAAT GTGCTCAGCG AGCATCAGAT GATCTATCGC
GCGATCGAAC GCCAAGACCC GGACGACGCG CGCGCCGCCA TGCGCATGCA CCTGAGCAAC
AGCCGCGAAC GGCTGCGTCG CGCTCACGAG TTGAGCAAAG CGGGCGATTG A
 
Protein sequence
MSSLTEKVVA TLSDEIRRGT LRPGDRIPTE VAMMKQLSVS RSVVREAISR LQAAKVVETR 
HGIGTFVLEP ATEKSMQLPA ADLSSMLDVM AIIEFRIDVE AASAALAAAR RTDQNLKQIR
GALERFESEL ERGSTDTLAH DIEFHLQIAR ASGNRYFFDV LSQLGRAVSP RTRLGSAEIA
ELDHIEHLRN VLSEHQMIYR AIERQDPDDA RAAMRMHLSN SRERLRRAHE LSKAGD