| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4087 |
|---|
| Symbol | |
|---|
| ID | 6280257 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 125233 |
|---|
| End bp | 126573 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642615188 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001887841 |
|---|
| Protein GI | 187918810 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGCAAAA TCGCAAGGAT TATTGCCGCG GCGCTCGGAC TCGGGTTGGC GTTAGGTCTT
GCCGGCTGCG GCGGGGGTGG CGGCGGCTCC AGCAGCAACT CGACGGCTAA CGCACCGGCT
AATGCACCGG TTGCCGCCAG CGCGCCGGCG GGCCCAGGCG GCACGATGTC CAACCCTTCG
ACCGGCGACT CGAGCTCCAA CACGCTCGCC GTCGATGCGT CTGCCGTGCC CACACCCGTC
GGCCCCGGCA ACACGATGTC GGTGACGGTA AGCGGAACGG GCATTCACAA CCAGCCGATG
GTCAGCGTCA AGCTCTGCGC CCCCGGCTCC AACGCAAGCA CGAGTTGCAC GACGATTCCC
AATGTGATTG TCGATACGGC ATCGTTCGGG CTGCGTCTGG TGCGCTCCGC GATCCCGACC
TCCACCTTCA ACGCGCTCAC CGCCGAAACG GATCAGTCGA GCGGTCTGCC GCTTGCTGAA
TGCGCATTGT TCGGCAGCGG TTATGCATGG GGTTCGGTGC ATCTCGCGGA CATCGGGCTG
TCGAGCGAGG TTGCCGCCTC GGTGCCGATC CAGGTGATCG GCGATTCGGC GCTGACCATT
GCCGCGCCGA GCGAATGCCA GGTGGGCCGG CCGCTCGCCG CCGCGTCCGA TCTCGGCGCG
AACGGCATTC TCGGCATCGG CGTCAGCCCG GTGGACTGCG GCTCGCAGTG TGCGCTGACG
GTGCTCTCGC AGTTCTATTA CACCAATGCC GGCAACGCGG TCTCGGTGCC GGTCTCCAAG
CAGATCAGCA ATCCGGTCGC ACGGTTCGCG CAAGATAACA ACGGTGTGAT TCTGGAAATG
GCGCAGGTGT CCGATAGCGG CAGCGCGACC GCTCAAGGCA CGCTCGTGTT CGGCATCGAT
ACGCAAGCCA ATAACGTGCT GAACGGCACG GGCGCGCCGA TTTTCCGAAC GGATCTGAAC
GGCGACTTCA CGTCGTCATA TGGCGGCACC ACGTTCACAC AGACGTTCTT CGATTCGGGC
TCGACGGTGA TGTTCTTTCC GGACACGACG ATCCCTCGCG ACACGTCGTC CGGCTATTAC
ATTCCGACCG CAACCGTGGG CCGTACCTCG ACGCTGATCG GGACCAATCC GGCGAGCGTG
TCACTCGGCT TCAATATTGC CAACGGCGCG ACGCTAACTT CATCGGGGAA TAACGCGTTC
AATAATCTCG GGATCTACAT GACCCGGCAG TTCGACTTCG GTTTGCCGTT CTTTTACGGC
CGTCATGTGT ATTACGGGAT TTCGGGGCGT GCTTCGTCGG GGGGCGGGAC GGGGCCGTAT
GTGGCTTATG TTTCGAGTTG A
|
|---|
| Protein sequence | MRKIARIIAA ALGLGLALGL AGCGGGGGGS SSNSTANAPA NAPVAASAPA GPGGTMSNPS
TGDSSSNTLA VDASAVPTPV GPGNTMSVTV SGTGIHNQPM VSVKLCAPGS NASTSCTTIP
NVIVDTASFG LRLVRSAIPT STFNALTAET DQSSGLPLAE CALFGSGYAW GSVHLADIGL
SSEVAASVPI QVIGDSALTI AAPSECQVGR PLAAASDLGA NGILGIGVSP VDCGSQCALT
VLSQFYYTNA GNAVSVPVSK QISNPVARFA QDNNGVILEM AQVSDSGSAT AQGTLVFGID
TQANNVLNGT GAPIFRTDLN GDFTSSYGGT TFTQTFFDSG STVMFFPDTT IPRDTSSGYY
IPTATVGRTS TLIGTNPASV SLGFNIANGA TLTSSGNNAF NNLGIYMTRQ FDFGLPFFYG
RHVYYGISGR ASSGGGTGPY VAYVSS
|
|---|
| |