Gene Bphyt_4086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4086 
Symbol 
ID6278555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp124279 
End bp125130 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content62% 
IMG OID642615187 
Producttranscriptional regulator, IclR family 
Protein accessionYP_001887840 
Protein GI187918809 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCCA ACAGCAAGCA GTCCGACGCG GCGGCGCTCA CCGGCGATTA CCTGGATTCG 
AAAGCGCGCT ACGTGCCGGA CGAATTCGAC GGCGACCGCC AGTTCGCCAC CACGCTGGCG
CGCGGCCTCG ACATCCTGCA TTGCTTCACG CCGCGCGAAT CGCAACTCGG CAATGCCGAA
TTGGCGGCGC GCACCGGCAT GACCAAGGCG ACGATTTCAC GCTTTACCTA CACGCTCACG
CGGCTCGGCT ATTTGCGCGT CAATCGGATG AATAACAAGT TTCAGCTCGG CTCGGCCGTG
TTGTCGCTGA GTTATCCGTT GCTTGCGAGC ATGAGCGTGC GCCAGATCGC GCGGCCGTCG
ATGAAGGAGC TGGCGGATCA GATTCGCGGT TCAGTTTCGC TCGGCATGCG TGACCGGCTC
AACGTCGTGT ATCTGGAAAG CAGCCGCAGC AGTACGCCGC TTGGAATGCC GGCGGATATC
GGGCTGAGCT ATCCGATCGT GCGAACGGCG ATGGGCCGCG CGCTGCTTGC GGCGCTGCCC
GCTGAGCGGC GCGAGGCGCT GTGCAATGAA ATCGCGGTGA AGTCGCCGCA TGAATGGAGC
ACCTTCCGCG AGCGCGTACT GAGCGCAATC GACTATTTCT ATGAGCGCGG CTTTTGCGTG
TCCTACGGCG ACCTGCGTCG CGAGATCCAT GCCGTTGCCG TGCCGATGAA GCCGTCAGCC
GATGGCGAGA TTCTCGTTTT CAATTGCGGC GTGCCTTCTT ATCTGCTGAA GGAGAAGCAA
CTGGAAGGCG ATATCGGGCC GCGGCTCGTT TCGATGGTGC GCAGTGTGGA AGGGGCGATG
GGAATTTACT GA
 
Protein sequence
MAANSKQSDA AALTGDYLDS KARYVPDEFD GDRQFATTLA RGLDILHCFT PRESQLGNAE 
LAARTGMTKA TISRFTYTLT RLGYLRVNRM NNKFQLGSAV LSLSYPLLAS MSVRQIARPS
MKELADQIRG SVSLGMRDRL NVVYLESSRS STPLGMPADI GLSYPIVRTA MGRALLAALP
AERREALCNE IAVKSPHEWS TFRERVLSAI DYFYERGFCV SYGDLRREIH AVAVPMKPSA
DGEILVFNCG VPSYLLKEKQ LEGDIGPRLV SMVRSVEGAM GIY