Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4086 |
Symbol | |
ID | 6278555 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 124279 |
End bp | 125130 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642615187 |
Product | transcriptional regulator, IclR family |
Protein accession | YP_001887840 |
Protein GI | 187918809 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGCCA ACAGCAAGCA GTCCGACGCG GCGGCGCTCA CCGGCGATTA CCTGGATTCG AAAGCGCGCT ACGTGCCGGA CGAATTCGAC GGCGACCGCC AGTTCGCCAC CACGCTGGCG CGCGGCCTCG ACATCCTGCA TTGCTTCACG CCGCGCGAAT CGCAACTCGG CAATGCCGAA TTGGCGGCGC GCACCGGCAT GACCAAGGCG ACGATTTCAC GCTTTACCTA CACGCTCACG CGGCTCGGCT ATTTGCGCGT CAATCGGATG AATAACAAGT TTCAGCTCGG CTCGGCCGTG TTGTCGCTGA GTTATCCGTT GCTTGCGAGC ATGAGCGTGC GCCAGATCGC GCGGCCGTCG ATGAAGGAGC TGGCGGATCA GATTCGCGGT TCAGTTTCGC TCGGCATGCG TGACCGGCTC AACGTCGTGT ATCTGGAAAG CAGCCGCAGC AGTACGCCGC TTGGAATGCC GGCGGATATC GGGCTGAGCT ATCCGATCGT GCGAACGGCG ATGGGCCGCG CGCTGCTTGC GGCGCTGCCC GCTGAGCGGC GCGAGGCGCT GTGCAATGAA ATCGCGGTGA AGTCGCCGCA TGAATGGAGC ACCTTCCGCG AGCGCGTACT GAGCGCAATC GACTATTTCT ATGAGCGCGG CTTTTGCGTG TCCTACGGCG ACCTGCGTCG CGAGATCCAT GCCGTTGCCG TGCCGATGAA GCCGTCAGCC GATGGCGAGA TTCTCGTTTT CAATTGCGGC GTGCCTTCTT ATCTGCTGAA GGAGAAGCAA CTGGAAGGCG ATATCGGGCC GCGGCTCGTT TCGATGGTGC GCAGTGTGGA AGGGGCGATG GGAATTTACT GA
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Protein sequence | MAANSKQSDA AALTGDYLDS KARYVPDEFD GDRQFATTLA RGLDILHCFT PRESQLGNAE LAARTGMTKA TISRFTYTLT RLGYLRVNRM NNKFQLGSAV LSLSYPLLAS MSVRQIARPS MKELADQIRG SVSLGMRDRL NVVYLESSRS STPLGMPADI GLSYPIVRTA MGRALLAALP AERREALCNE IAVKSPHEWS TFRERVLSAI DYFYERGFCV SYGDLRREIH AVAVPMKPSA DGEILVFNCG VPSYLLKEKQ LEGDIGPRLV SMVRSVEGAM GIY
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