| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4080 |
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| Symbol | |
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| ID | 6277961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 115165 |
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| End bp | 117393 |
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| Gene Length | 2229 bp |
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| Protein Length | 742 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642615181 |
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| Product | isocitrate dehydrogenase, NADP-dependent |
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| Protein accession | YP_001887834 |
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| Protein GI | 187918803 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
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| TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACAC CGCCGAAGAT CATCTACACC CTGACCGACG AAGCGCCTGC TCTGGCGACT
TACTCGCTGC TGCCGATCGT GAAGGCGTTC ACGCGCTCGT CCGACGTGAT CGTCGAAACG
CGCGATATTT CGCTTGCCGG CCGGATCATC GCTGCATTCC CCGATTACCT GAGCGCGGAA
CAGAAGGGTC CCGACGATCT GGCGGAACTG GGTGGACTCA GCACGCGTCC GGAAGCGAAT
GTCATCAAGC TGCCGAACAT CAGCGCGTCG GTGCCGCAAC TGAAGGCCGC GATCACCGAA
CTGCGCGATC AGGGCTACAA GCTGCCGGCG TATCCGGACG TCGCGAACAC GGACGCCGAA
AAAGACGTCA AGGCGCGCTA CGACAAGATC AAGGGCAGCG CGGTCAACCC GGTGCTGCGC
GAAGGCAATT CGGACCGCCG CGCGCCGCTG TCGGTCAAGA ACTACGCCCG CAAGCATCCG
CACAAGATGG GCGCGTGGAG CGCGGACTCG AAGTCGCACG TCGCGCACAT GAGCGGCGGC
GATTTCTACG GTAGCGAAAA GTCGGCGCTG ATCGGCGCAG CCGGTTCGGT GAAGATCGAA
CTGACGGCGA CTGACGGTTC GAAGACAGTC CTCAAAGAAA AGACGGCCGT GCAAGCAGGC
GAGATCATCG ACGCTTCGGT GCTGTCGAAG AACGCGCTGC GCAGCTTCAT CGAAGCGGAA
ATCGCCGACG CGAAGGCCAA GGGCGTGCTG TTCTCGGTGC ACCTGAAGGC CACCATGATG
AAGGTGTCGG ACCCGATCAT CTTCGGTCAC GTGGTGTCGG TGTTCTACAA AGACGTGCTG
ACCAAGCACG CCGACGCGCT CGCGCAAGCC GGCTTCAACC CGAACAACGG TATCGGCGAT
CTGTACGCGC GCCTGAAAGA CCTGCCGGCT GAAACGGTCG CCGCGATCGA AGCCGACATC
AAGGCGCAAT ACGAACAGCG TCCGCAACTG GCCATGGTCA ATTCGGACAA GGGCATCACC
AGCCTGCACG TGCCGAGCGA CGTGATCGTC GACGCGTCCA TGCCGGCCAT GATCCGCGAG
TCGGGCAAGA TGTGGGGCGC GGACGGCGCG CTGCACGACG CCAAGGCCGT GATTCCGGAC
CGCTGCTACG CAGGCGTTTA TCAGGCAGTG ATCGAAGACT GCAAGAAGCA CGGCGCGTTC
GATCCGGTCA CGATGGGCAC GGTGCCCAAC GTCGGCCTGA TGGCGCAAGC GGCTGAAGAA
TACGGCTCAC ACGACAAGAC GTTCCAGATC CCGGCGAACG GCGTGGTTCG CGTGACGGAC
GCAGCCGGCA CGGTGCTGAT CGAACAGCAA GTGGAAGCGG GCGACATCTG GCGCATGTGC
CAGACCAAGG ACGCGCCGGT TCAGGACTGG GTCAAGCTCG CGGTCAACCG CGCCCGCGCT
ACCAACACGC CGGCCGTGTT CTGGCTGGAT GCGGCGCGCG CGCACGACGC CCAGATCATC
AAGAAGGTCG AGCAATACCT GAAGAACCAC GACACCACCG GTCTGGACAT TCGCGTCATG
ACGCCGGTCG AAGCGACCAA GTTCTCGATC GAGCGTATTC GCGCGGGCAA GGACACGATC
TCGGTCACCG GCAACGTGCT GCGCGACTAC CTGACCGACC TGTTCCCGAT CATGGAACTG
GGCACGAGCG CGAAGATGCT GTCGATCGTC CCGCTGATGG CTGGCGGCGG CATGTTCGAA
ACCGGCGCGG GCGGTTCGGC GCCGAAGCAC GTTCAGCAAC TGGTCGAAGA AGGTTTCCTG
CGTTGGGATT CGCTCGGTGA ATTCCTGGCG TTGGCCGCGT CGCTCGAACA TTTGAGCAGT
GCGTATCACA ACCCGAAGGC GCAGGTGCTG GCCAAGACGC TGGATCAGGC AACCGGCAAG
TTCCTCGACA ACGACAAGTC GCCGGCGCGC AAGGTTGGCG GCATCGACAA TCGCGGCAGC
CACTTCTACC TTGCGCTCTA CTGGGCGGAA GCACTGGCCG CGCAAACCGA AGACGCGGCG
CTGCAGGCGC AATTCGCCGG CGTGGCGAAG GCACTGGCTG AGAACGAAGC GAAGATCGTC
GAAGAACTGG CTGCGGCACA AGGCAAGCCG GTGGATATTG GCGGTTACTA TCGTCCGAAT
GTCGAACTGA CGAGCAAGGC CATGCGCCCG AGCGCCACGC TGAACAAGAT CGTGGACGCG
ATTGCTTAA
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| Protein sequence | MSTPPKIIYT LTDEAPALAT YSLLPIVKAF TRSSDVIVET RDISLAGRII AAFPDYLSAE
QKGPDDLAEL GGLSTRPEAN VIKLPNISAS VPQLKAAITE LRDQGYKLPA YPDVANTDAE
KDVKARYDKI KGSAVNPVLR EGNSDRRAPL SVKNYARKHP HKMGAWSADS KSHVAHMSGG
DFYGSEKSAL IGAAGSVKIE LTATDGSKTV LKEKTAVQAG EIIDASVLSK NALRSFIEAE
IADAKAKGVL FSVHLKATMM KVSDPIIFGH VVSVFYKDVL TKHADALAQA GFNPNNGIGD
LYARLKDLPA ETVAAIEADI KAQYEQRPQL AMVNSDKGIT SLHVPSDVIV DASMPAMIRE
SGKMWGADGA LHDAKAVIPD RCYAGVYQAV IEDCKKHGAF DPVTMGTVPN VGLMAQAAEE
YGSHDKTFQI PANGVVRVTD AAGTVLIEQQ VEAGDIWRMC QTKDAPVQDW VKLAVNRARA
TNTPAVFWLD AARAHDAQII KKVEQYLKNH DTTGLDIRVM TPVEATKFSI ERIRAGKDTI
SVTGNVLRDY LTDLFPIMEL GTSAKMLSIV PLMAGGGMFE TGAGGSAPKH VQQLVEEGFL
RWDSLGEFLA LAASLEHLSS AYHNPKAQVL AKTLDQATGK FLDNDKSPAR KVGGIDNRGS
HFYLALYWAE ALAAQTEDAA LQAQFAGVAK ALAENEAKIV EELAAAQGKP VDIGGYYRPN
VELTSKAMRP SATLNKIVDA IA
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