| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4078 |
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| Symbol | |
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| ID | 6279852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 111631 |
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| End bp | 112569 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642615179 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_001887832 |
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| Protein GI | 187918801 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACA TCCTCGATGG TGTGACGACG TTCGTGCGCG TGGTCGAAAC AGGCAGTTTT
GCGCTCGCGG CGGAGCGGAT GAACCTGACG CGCTCGGCGG TCGGCAAAGT GATCGTGCGG
TTGGAGAAGC GCCTCGGCGT GCGCCTGCTC AATCGGACGA CGCGCAGCCA GAGCCTCACC
GAAGACGGGC AGGCTTACTA CGACCGCTGC GTGCGCGCGC TGGCCGAGCT CGAAGCCGCG
GAGGCGGATC TCGACTCCGG CCGTCGCGAG CCCCAAGGCC GTTTGCGCGT GAGCGTGCCG
CAGGCATTCG GTCACTACTG CGTGGCGCCG GTGCTGCTCG GACTTGCGCG CAAGCATCCG
CAATTGAAGA TCGACATTTC GATTACCGAT CGTTTCGTCG ACGTGATCGA AGAGGGTTTC
GATCTCGTGG TGCGCGTGGG CCCGCTGGCC GACAGCGTGA GTCTCGCCGC GCGCAAGCTC
GGCATGCAGC ATGCGAGTAT CGGCGCCGCG CCGGCGTATC TGGCGCGTCA TGGCACGCCA
CGCAACGTGG AGGAATTACG CGGTCACGCT GTGATCGGCT ACTTGCGAGC AGGATCGGCG
CAGCCGTGGG ATGTGGTCGA TGTCGACGGC CAAATTCGCC GCGCGCAGGT TCAGCCGCAG
CTCGGTTTCG ACGACATGAA GGGGATCGTG GATGCCGCTC TCGCTGGCTT CGGCCTCGCG
TGGCTGCCGA GTTGGCTATT GACCCGTTAT GAGAAAACGG GCGAGCTGGT GACAGTGATG
GAGAATTGTT TCCGGCCTGC TCAGGAGATT CATCTGGTGT GGCCGAAGAG TCGCTATCTG
GCGCTGAAAA CGCGCTGTGC GATCGATGCG TTGGTCGCGG AGATTCCCGC CATGATCGGG
GCGCCCGCTC CGGGCGCCCC TCGTTCACGC GATGCTTAG
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| Protein sequence | MSDILDGVTT FVRVVETGSF ALAAERMNLT RSAVGKVIVR LEKRLGVRLL NRTTRSQSLT
EDGQAYYDRC VRALAELEAA EADLDSGRRE PQGRLRVSVP QAFGHYCVAP VLLGLARKHP
QLKIDISITD RFVDVIEEGF DLVVRVGPLA DSVSLAARKL GMQHASIGAA PAYLARHGTP
RNVEELRGHA VIGYLRAGSA QPWDVVDVDG QIRRAQVQPQ LGFDDMKGIV DAALAGFGLA
WLPSWLLTRY EKTGELVTVM ENCFRPAQEI HLVWPKSRYL ALKTRCAIDA LVAEIPAMIG
APAPGAPRSR DA
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