| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4074 |
|---|
| Symbol | |
|---|
| ID | 6278568 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | + |
|---|
| Start bp | 105179 |
|---|
| End bp | 106549 |
|---|
| Gene Length | 1371 bp |
|---|
| Protein Length | 456 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642615175 |
|---|
| Product | L-ornithine 5-monooxygenase |
|---|
| Protein accession | YP_001887828 |
|---|
| Protein GI | 187918797 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3486] Lysine/ornithine N-monooxygenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0146729 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACAGAG ACACCGTATT TGATCTGATC GGAATCGGCT TCGGACCGTC GAATCTCGCG
CTTGCCGTTC GCCTCGCCGA AGAGGCCGGC GTGTCGGACC TCGCGCATTG CTTCATCGAA
CGTCAGCCGG AATTCGGCTG GCACCGCGGC ATGTTGCTCG ACGATTGCCG GATGCAGATT
TCCTTCCTCA AGGATCTCGT GACAATGCGC GATCCGAAAA GCCGCTTCAC GTTCATCAAT
TATCTGTTCG AGCATGGACG TCTGGCGGAT TTCGTCAATC TGAAGAACTT CTATCCGACG
CGCGTGGAGT TTCACGATTA CCTGAGCTGG GTCGCGGCGT CGTTCGACGA TCGCGTGAAC
TACGGGCAAA CCGTCACCGG CATCGAAGCG GTCAGGAGCA CTGCGAATAC GAATGACGTC
GAAGCACTAC GGGTTTTCTC GCGCGACAGC GAAGGCCGCG AGTGGCAGCG CGTGACACGG
GCGCTGTCGG TCGGCATCGG CGGCGGTCCG CAAGTGCCGG AAGCATTTGC CGCGCTCGGC
ACGCATAACA TCGTGCATTC GTCGCAGTAC CTGACGTCCA TCGACCGTGC GGTCGGACCC
GCTGACGGCG CGCGAAAACG CGTGGCGGTG ATCGGCGCGG GGCAGAGCGC GGCCGAGGTG
TTCGTCGATC TGACGCGCCG CTTTCCGCAC GTGGATGCGA GCCTCATCAT CCGCTCGAGC
GCGCTGAAAC CCGCCGACGA CAGCCCCTTC GTCAACGAGA TCTTCAGCCC CGCCTTTACC
GATATCGTCT ACGCGCAGCC GCGCGACGGC CGCCGTTCGC TGATCGAGCG CTTTCGTGAC
ACCAATTACG CGGTGGTCGA CCGTCCGCTC ATCGAGCAGA TCTACGAAAT GCTTTATCTG
CAGAACGTGT CCGCCGATCC GCGGCACCGG CTGCTGGCGA ACACCGGCAT CGAAACGGCG
GTGCGCACGG CGGGCGGGCA GATCGAACTC ACGCTGCGTG ATCGTCTGAG CGGCCACGCG
CGAGCCGAGC AATTCGACGC GCTCGTGCTC GCGACGGGCT ATCGCCGCGA CACGCATTTC
GACCTGCTGG ATGGGCTCGC GCCGCATCTC GGCGATGCGC TTGCGCAAGG CAACGTCGAG
CGCGACTACC GGCTCGCCAC GCCGGCGAGT TTCAAGCCGC GCGTTTATCT GCAGGGCTGT
TGCGAAGATA GTCATGGGCT CTCCGACACG CTGCTGTCGG TGCTCGCGCT GCGCTCGGAC
GAAATCGCCA CGTCTCTCGC ACGCCATGCA TCGCAAGACC GATCTGGCGG CCGGACACCA
CAAGCACAAG AAAACGCGAC GGGCGTGGGC CGCATGGCCT TTGCTCTTTA A
|
|---|
| Protein sequence | MHRDTVFDLI GIGFGPSNLA LAVRLAEEAG VSDLAHCFIE RQPEFGWHRG MLLDDCRMQI
SFLKDLVTMR DPKSRFTFIN YLFEHGRLAD FVNLKNFYPT RVEFHDYLSW VAASFDDRVN
YGQTVTGIEA VRSTANTNDV EALRVFSRDS EGREWQRVTR ALSVGIGGGP QVPEAFAALG
THNIVHSSQY LTSIDRAVGP ADGARKRVAV IGAGQSAAEV FVDLTRRFPH VDASLIIRSS
ALKPADDSPF VNEIFSPAFT DIVYAQPRDG RRSLIERFRD TNYAVVDRPL IEQIYEMLYL
QNVSADPRHR LLANTGIETA VRTAGGQIEL TLRDRLSGHA RAEQFDALVL ATGYRRDTHF
DLLDGLAPHL GDALAQGNVE RDYRLATPAS FKPRVYLQGC CEDSHGLSDT LLSVLALRSD
EIATSLARHA SQDRSGGRTP QAQENATGVG RMAFAL
|
|---|
| |