Gene Bphyt_4067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4067 
Symbol 
ID6280436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp83827 
End bp85935 
Gene Length2109 bp 
Protein Length702 aa 
Translation table11 
GC content71% 
IMG OID642615168 
Productiron-hydroxamate transporter permease subunit 
Protein accessionYP_001887821 
Protein GI187918790 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.696001 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGC TTGCCGCACG CAAACGCCTG AGCCGCAGCA CCCAGGCGAT GGACAGCTAT 
CGCGCGCCCG TCAAGAGCCG CGTCACGACA ATCGGCGCCG CGCTCGTTGC GTTGATCGTC
ATCGTGGCGG TGATGCGGCT CGCGCCCGGC TTCCGCACAT GGCTCGCCGC GCCCACAGGC
AGCGACGCCG CGCAGCTCGC CGGCATTCTG CTGTTCGACC TGAGCGTGCC GCGCATTCTG
GCGGCACTGG TGGCGGGCGG CTGCCTCGCG GTGGCCGGCA CCTTGTTTCA ATCGCTGACG
CGTAACCCTT TGGCTTCGCC CGATCTGCTC GGTATCACCG GCGGCGCGCA ACTCGGCTTG
CTCGCCGCGA TGCTGGTGCC CTCGCTCGCG GGCGTGGCGT CCGTGCCGCT GCTGTTCGCG
TGCGGTCTGG GCGCCGCCGC CTGCGTGGCC GCGGCGGCTG GCGGCTGGCG CGCGACGCCG
TTGCGGCTCG TGCTCGCCGG CAGCGTCTGC ATGCTGCTGT TCTCTGCGCT GACCACGCTG
ATTCTCGCGT TCTTCGAGCA GAGTATCGTC GGCGTGTCGT TGTGGGCGAG TGGCAGTCTT
TATCAACCCG GCGCGGCGGG TTTGAAGATC GCCGCGTCCT GGCTCGTGTT GCCGCTGATC
GCGTTGCCCT TCGTGATTCG TCCGCTCGAT CCGCTCGCCT TGGGCGACGA CGCCGCGGCG
GCAGCCGGCG TTCGCGTGGA TGCCACGCGC CTCGCGGCGA TGGTGGTTGC GGTGGGCTTC
GCGAGCGTCG CGGTGAGTGT CGCGGGACCG CTTTCGTATG TCGGCCTGAT CGCGCCGAAC
CTGCTGCGTC AGATGCGGGG TGCGAAAGCG TCGCGGTTGG CCGCGCTCGT GCCCTTGTCC
GCGCTGGTCG GCGGCGCGCT GGTGCTCGTC ACCGATAGTG CCGTGCAGGC GCTCGATCTC
GACGCGACGC TTTCGACCGG CGTGGCGATT GCCTTCGTCG GCACGCCGTT GATGCTCGCG
ATGATCCGCA GCGGCGCCGC ATGGTCGGGC GCGTTGCATG CCGGTCAGGA GCGCGCCGTC
GCGCGAGCGG GCACGCGTTT CGTGCGCGCG ATCGATGCGC GGCCGTGGCC GCTGACGGCC
AGCGCGTTGG TGCTGCTCGG CGTCGTGCTC GTGTGTGCGG GCGCGTCGTT CGGTCCCACC
ACGATCGGTG CGCAGCGCTG GCTCGCCGCG TTCGATCACC GCGACGAACT CGCGCGGATG
TTGCTCGACC TGCGCTTGCC GCGCCTCATC TGCGCGTTGC TCGCGGGCGC GCTGCTCGCC
GCGAGCGGGG TGCTGATGCA AAGCATCGTG CGCAATCCGC TCGCCGGACC TGAAGTACTG
GGCGTGACCC AGGGCGCGGG CCTCGCGACG CTCGCCGCGC TCGTGATGTG GCCGCTTGCG
AACCACTCGA CACTGGCCGC CGCTTCGCTC GCGGGTGGCG GCATCACGCT GGCTCTGACG
CTCCTGCTGA ATCGCCGGCA TCGCTATGCG CCGCTCGCGG TCGCGCTGAC GGGCATCGTC
ATCGGCACGC TGTGGACGAC GCTGTCGCAA TGGCTGATCA CGCAGCAAAG CGTGCAGCCC
GCGCGCTTCG TCGTGTGGCT GGTGGGCGGC ACATATGGGC GCAGCTGGGG CGAAGTGACG
ACGTTGCTGC CGTGGTGCGT GCTGGCCTTG CCGGTTTTCG CGCTACTCGC GCGGCCGCTC
GATCTGCTTG CATTGGGCGA CGACCAGGCG GCCTCGCTGG GCTTGCCGAT CGGCGTGTTG
CGTCCGCTGG TGCTGACGGT GGCGACGCTC GCCGCGTGCG CCGCGGTGGC CGCGGTGGGA
CCGGTGGGCT TTATCGGTTT GATGGCGCCG CATCTGGCGT CGATGCTCGG TGCGCGGGCT
CATCGCACGC GCTTGTGGCT GGCGGCGGCG TGCGGCGCGC TGGTGCTGGT CGTGGCCGAT
ATCGCGGCGC GCACGCTGCT GGCGCCGCGC GAAATTCCCG CCGGCGTCCT GACCGCGTTG
ATCGGCGCGC CTTATCTGCT CGCGCTGCTG ATCGTGGAGG CTCGGCGCGA GAAGCGGGGC
AAACGGTGA
 
Protein sequence
MTTLAARKRL SRSTQAMDSY RAPVKSRVTT IGAALVALIV IVAVMRLAPG FRTWLAAPTG 
SDAAQLAGIL LFDLSVPRIL AALVAGGCLA VAGTLFQSLT RNPLASPDLL GITGGAQLGL
LAAMLVPSLA GVASVPLLFA CGLGAAACVA AAAGGWRATP LRLVLAGSVC MLLFSALTTL
ILAFFEQSIV GVSLWASGSL YQPGAAGLKI AASWLVLPLI ALPFVIRPLD PLALGDDAAA
AAGVRVDATR LAAMVVAVGF ASVAVSVAGP LSYVGLIAPN LLRQMRGAKA SRLAALVPLS
ALVGGALVLV TDSAVQALDL DATLSTGVAI AFVGTPLMLA MIRSGAAWSG ALHAGQERAV
ARAGTRFVRA IDARPWPLTA SALVLLGVVL VCAGASFGPT TIGAQRWLAA FDHRDELARM
LLDLRLPRLI CALLAGALLA ASGVLMQSIV RNPLAGPEVL GVTQGAGLAT LAALVMWPLA
NHSTLAAASL AGGGITLALT LLLNRRHRYA PLAVALTGIV IGTLWTTLSQ WLITQQSVQP
ARFVVWLVGG TYGRSWGEVT TLLPWCVLAL PVFALLARPL DLLALGDDQA ASLGLPIGVL
RPLVLTVATL AACAAVAAVG PVGFIGLMAP HLASMLGARA HRTRLWLAAA CGALVLVVAD
IAARTLLAPR EIPAGVLTAL IGAPYLLALL IVEARREKRG KR